RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PPP1R36Q96LQ0 422 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 TNFRSF13CQ96RJ3 184 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 SERPINI1Q99574 410 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 COPS8Q99627 209 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CCT7Q99832 543 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 LIME1Q9H400 295 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 MEAF6Q9HAF1 191 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 MRPL40Q9NQ50 206 aaKnown RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 RDH8Q9NYR8 311 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CD274Q9NZQ7 290 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 FIS1Q9Y3D6 152 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NOTCH4Q99466 2003 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 PTPRSQ13332 1948 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 MTCL1Q9Y4B5 1905 aaKnown RBP3.36□□□□□ -1.87
SMCO3-201ENST00000316048 OBSL1O75147 1896 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 TRBV5-4A0A0C4DH59 114 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 RNF222A6NCQ9 220 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 A8MUI8 341 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 MEI4A8MW99 385 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 CDC7O00311 574 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 SDHDO14521 159 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 AZIN1O14977 448 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 RAD51BO15315 384 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 TNFSF12O43508 249 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 CEACAM4O75871 244 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 ZFAND5O76080 213 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 NXPH2O95156 264 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 PAHP00439 452 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 KRT6BP04259 564 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 FCER2P06734 321 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 CALCBP10092 127 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 UGT1A4P22310 534 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 PRKACGP22612 351 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 UGT1A3P35503 534 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 UGT1A5P35504 534 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 KRT6CP48668 564 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 SPINT3P49223 89 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 ART3Q13508 389 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 TGFBIQ15582 683 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 TSNQ15631 228 aaKnown RBP3.36□□□□□ -1.87
SMCO3-201ENST00000316048 MLF2Q15773 248 aaPredicted RBP3.36□□□□□ -1.87
SMCO3-201ENST00000316048 HKDC1Q2TB90 917 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 HLA-BQ31612 363 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 TRMT5Q32P41 509 aaKnown RBP3.36□□□□□ -1.87
SMCO3-201ENST00000316048 LRIT3Q3SXY7 679 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 RUSC1-AS1Q66K80 236 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 LRRC66Q68CR7 880 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 CPNE9Q8IYJ1 553 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 DEFB107AQ8IZN7 70 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 GPR26Q8NDV2 337 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 OR2A12Q8NGT7 310 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 AGAP11Q8TF27 550 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 ING5Q8WYH8 240 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF707Q96C28 371 aaPredicted RBP3.36□□□□□ -1.87
SMCO3-201ENST00000316048 DCUN1D1Q96GG9 259 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 C4orf36Q96KX1 117 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 ANKRD27Q96NW4 1050 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 CATSPER2Q96P56 530 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 MCCC1Q96RQ3 725 aaPredicted RBP3.36□□□□□ -1.87
SMCO3-201ENST00000316048 NDUFAF3Q9BU61 184 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 SPATA16Q9BXB7 569 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 RAB33BQ9H082 229 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 C2orf42Q9NWW7 574 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 NUDT4Q9NZJ9 180 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 DEC1Q9P2X7 70 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 GALPQ9UBC7 116 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF346Q9UL40 294 aaKnown RBP3.36□□□□□ -1.87
SMCO3-201ENST00000316048 DENND4CQ5VZ89 1909 aa3.36□□□□□ -1.87
SMCO3-201ENST00000316048 A0A0U1RQS6 177 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 NCF1BA6NI72 391 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 IQCF5A8MTL0 148 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 NCF1CA8MVU1 366 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 H0YL77 283 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 M0QX08 132 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PSMD12O00232 456 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 UBFD1O14562 309 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 AIM2O14862 343 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 FKBP6O75344 327 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ENTPD5O75356 428 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 CDK14O94921 469 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR4F21O95013 312 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PSMG1O95456 288 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ANP32DO95626 131 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TSPAN12O95859 305 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 CISD3P0C7P0 127 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PBLDP30039 288 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 FCGR2BP31994 310 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PTGFRP43088 359 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 HNMTP50135 292 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ATP4BP51164 291 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PKNOX1P55347 436 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ACTR3P61158 418 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PDGFRLQ15198 375 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 CDKL4Q5MAI5 379 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 GPRC6AQ5T6X5 926 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 C1orf146Q5VVC0 180 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 CLEC6AQ6EIG7 209 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ARHGAP11AQ6P4F7 1023 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms