RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 TMED1Q13445 227 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MS4A18Q3C1V0 323 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ARHGAP11AQ6P4F7 1023 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 C6orf15Q6UXA7 325 aaPredicted RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TMEM156Q8N614 296 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ARIH2OSQ8N7S6 290 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PELI1Q96FA3 418 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TIMMDC1Q9NPL8 285 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 B3GAT2Q9NPZ5 323 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 P4HTMQ9NXG6 502 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 KCNG2Q9UJ96 466 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 STUB1Q9UNE7 303 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 FTCDNL1E5RQL4 147 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 GABRPO00591 440 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 GALR2O43603 387 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SNX4O95219 450 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 FBXO45P0C2W1 286 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 DLSTP36957 453 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 STARP49675 285 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 POLR2HP52434 150 aaKnown RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 BIKQ13323 160 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TRIP6Q15654 476 aaKnown RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 CARTPTQ16568 116 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PLPPR5Q32ZL2 321 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TMEM176BQ3YBM2 270 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 STPG1Q5TH74 334 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 LINC00696Q6ZRV3 163 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 GRINAQ7Z429 371 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 YRDCQ86U90 279 aaKnown RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 UBE2J2Q8N2K1 259 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 KLHL36Q8N4N3 616 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 OR51A4Q8NGJ6 313 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 C9orf43Q8TAL5 461 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 NSMAFQ92636 917 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 OR5B2Q96R09 309 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 UCN2Q96RP3 112 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TMEM43Q9BTV4 400 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 NMNAT2Q9BZQ4 307 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 ABCB10Q9NRK6 738 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 CSAG2Q9Y5P2 127 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 NCOR2Q9Y618 2525 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TRAV36DV7A0A075B6V5 113 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 LOC102723996A0A087X1L8 192 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 A0A1W2PQD3 144 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TBX1O43435 398 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC16A7O60669 478 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PAHP00439 452 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 HLA-DQA2P01906 255 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 GUSBP08236 651 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 CELA3AP09093 270 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC2A2P11168 524 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 CALRP27797 417 aaKnown RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SDHAP31040 664 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 C17orf67Q0P5P2 114 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 MOGQ16653 247 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 DGUOKQ16854 277 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TBC1D25Q3MII6 688 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 CDCP2Q5VXM1 449 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 USP43Q70EL4 1123 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 JAZF1Q86VZ6 243 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 RPS19BP1Q86WX3 136 aaKnown RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 LINC00346Q8IVM7 164 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 UBQLNLQ8IYU4 475 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PRSS33Q8NF86 280 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 GHSRQ92847 366 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 UFD1Q92890 307 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TMCO6Q96DC7 493 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 TEX12Q9BXU0 123 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 WDR54Q9H977 334 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 ABCB9Q9NP78 766 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 BABAM2Q9NXR7 383 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PLPP3O14495 311 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 CDAP32320 146 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 EIF1AXP47813 144 aaKnown RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 GALEQ14376 348 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PON3Q15166 354 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 NTRK2Q16620 822 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 FAM69AQ5T7M9 428 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 METAP1DQ6UB28 335 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 UTS2BQ765I0 119 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC35F2Q8IXU6 374 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 BEST3Q8N1M1 668 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 ESX1Q8N693 406 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 EXD3Q8N9H8 876 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 OR2M3Q8NG83 312 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 OR6N2Q8NGY6 317 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 OR8K3Q8NH51 312 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SNRNP27Q8WVK2 155 aaKnown RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PSMF1Q92530 271 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 ABTB1Q969K4 478 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PGLYRP3Q96LB9 341 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PRRG3Q9BZD7 231 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 SPRY4Q9C004 299 aa6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 PLEKHB1Q9UF11 243 aaPredicted RBP6.29□□□□□ -1.4
LYSMD3-201ENST00000315948 ACOD1A6NK06 481 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 A8MVM7 634 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 EIF4E2O60573 245 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 MRPS14O60783 128 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms