RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.44
SKA3-202ENST00000314759 PILRAQ9UKJ1 303 aa12.27□□□□□ -0.44
SKA3-202ENST00000314759 A0A1W2PQU0 124 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 CYR61O00622 381 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 SNAPC5O75971 98 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 NKX2-2O95096 273 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 IGKV1D-16P01601 117 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 DLX5P56178 289 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 ERVK-25P63136 954 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 FAM74A1Q5RGS3 127 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 FCRL6Q6DN72 434 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 ULK3Q6PHR2 472 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 DPY19L2P2Q6ZN68 376 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 DNM1P46Q6ZS02 220 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 SPRED2Q7Z698 418 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 CDH26Q8IXH8 852 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 NSMAFQ92636 917 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 CTHRC1Q96CG8 243 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 ASB16Q96NS5 453 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 USB1Q9BQ65 265 aaKnown RBP12.27□□□□□ -0.45
SKA3-202ENST00000314759 SLC17A9Q9BYT1 436 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 TCF7L1Q9HCS4 588 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 LYRM4Q9HD34 91 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 POLE3Q9NRF9 147 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 MRTO4Q9UKD2 239 aaKnown RBP12.27□□□□□ -0.45
SKA3-202ENST00000314759 URADA6NGE7 173 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 HMSDA8MTL9 139 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 TMEM127O75204 238 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 TIMP1P01033 207 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 ITPKBP27987 946 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 MNDAP41218 407 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 SOX2P48431 317 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 AKR1D1P51857 326 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 RPS21P63220 83 aaKnown RBP12.27□□□□□ -0.45
SKA3-202ENST00000314759 PSG6Q00889 435 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 SLC35D3Q5M8T2 416 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 LINC01590Q5TEZ4 76 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 ABHD13Q7L211 337 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 ZNF511Q8NB15 262 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 OR52R1Q8NGF1 315 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 STK35Q8TDR2 534 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 MRPL48Q96GC5 212 aaKnown RBP12.27□□□□□ -0.45
SKA3-202ENST00000314759 Q96M85 177 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 MRI1Q9BV20 369 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 DPP7Q9UHL4 492 aa12.27□□□□□ -0.45
SKA3-202ENST00000314759 LINC01387J3KSC0 135 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 GLSO94925 669 aaPredicted RBP12.26□□□□□ -0.45
SKA3-202ENST00000314759 KAT7O95251 611 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 NAT2P11245 290 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 CCL5P13501 91 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 C5AR1P21730 350 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 CBX5P45973 191 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 UBXN2BQ14CS0 331 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 EIF4E3Q8N5X7 224 aaKnown RBP12.26□□□□□ -0.45
SKA3-202ENST00000314759 OR4D10Q8NGI6 311 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 SLC6A17Q9H1V8 727 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 MKKSQ9NPJ1 570 aaPredicted RBP12.26□□□□□ -0.45
SKA3-202ENST00000314759 ATPIF1Q9UII2 106 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 EML5Q05BV3 1969 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 TICRRQ7Z2Z1 1910 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 OR8G3PP0DMU2 310 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 FNTBP49356 437 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 NDUFAF6Q330K2 333 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 PCGF3Q3KNV8 242 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 Q499Y3 187 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 PDSS1Q5T2R2 415 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 C1orf53Q5VUE5 145 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 MAMSTRQ6ZN01 415 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 LRRTM1Q86UE6 522 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 NAXDQ8IW45 347 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 GLB1L2Q8IW92 636 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 BOLLQ8N9W6 283 aaKnown RBP12.26□□□□□ -0.45
SKA3-202ENST00000314759 SLC22A18Q96BI1 424 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 TSSK2Q96PF2 358 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 ALG12Q9BV10 488 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.26□□□□□ -0.45
SKA3-202ENST00000314759 FRRS1LQ9P0K9 344 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 MOKQ9UQ07 419 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 KLHDC2Q9Y2U9 406 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 KLF2Q9Y5W3 355 aaPredicted RBP12.26□□□□□ -0.45
SKA3-202ENST00000314759 ATG2BQ96BY7 2078 aa12.26□□□□□ -0.45
SKA3-202ENST00000314759 GOSR2O14653 212 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 ARPC3O15145 178 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 TNFSF14O43557 240 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 GLCEO94923 617 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 ZNF10P21506 573 aaPredicted RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 RBMS2Q15434 407 aaKnown RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 FIGLAQ6QHK4 219 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 TMPRSS12Q86WS5 348 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 CAMKVQ8NCB2 501 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 OR4C16Q8NGL9 310 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 OR14C36Q8NHC7 312 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 SCARF2Q96GP6 870 aaPredicted RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 MED11Q9P086 117 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 ETV7Q9Y603 341 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 A0A1B0GTH9 108 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 TMEM72A0PK05 275 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 UBE2QL1A1L167 161 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 PRSS38A1L453 326 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms