RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 LGALS4P56470 323 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 SECTM1Q8WVN6 248 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 MARC2Q969Z3 335 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 SLC46A1Q96NT5 459 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 TPPP3Q9BW30 176 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 ADIRFQ15847 76 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 LYRM7Q5U5X0 104 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 SPI1P17947 270 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 ENPP1P22413 925 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 HIST1H1TP22492 207 aaPredicted RBP14.4□□□□□ -0.1
HCFC1-201ENST00000310441 SLC35A2P78381 396 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 SLC9A3R2Q15599 337 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 OR52H1Q8NGJ2 320 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 TAF9BQ9HBM6 251 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 SLC16A7O60669 478 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 MAP4K2Q12851 820 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 SLC35D1Q9NTN3 355 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 SLC2A8Q9NY64 477 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 ENSAO43768 121 aaKnown RBP14.4□□□□□ -0.1
HCFC1-201ENST00000310441 PRAMEF4O60810 478 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 DUSP1P28562 367 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF732B4DXR9 585 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 B3GALNT1O75752 331 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 F7P08709 466 aaPredicted RBP14.4□□□□□ -0.1
HCFC1-201ENST00000310441 SUMO1P63165 101 aaKnown RBP14.4□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF765Q7L2R6 523 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 FCRLAQ7L513 359 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 B3GNT8Q7Z7M8 397 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 RCE1Q9Y256 329 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 MEIS3P1A6NDR6 274 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 EMX1Q04741 257 aaPredicted RBP14.4□□□□□ -0.1
HCFC1-201ENST00000310441 TSPAN31Q12999 210 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 PODNL1Q6PEZ8 512 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 TMEM184AQ6ZMB5 413 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 QRSL1Q9H0R6 528 aaKnown RBP14.4□□□□□ -0.1
HCFC1-201ENST00000310441 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 CAMK2AQ9UQM7 478 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 POMT1Q9Y6A1 747 aa14.4□□□□□ -0.1
HCFC1-201ENST00000310441 G3V2L1 256 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 CYTIPO60759 359 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 TIGITQ495A1 244 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 SUMF1Q8NBK3 374 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 ZFP90Q8TF47 636 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 OMGP23515 440 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 RFC3P40938 356 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 RETREG3Q86VR2 466 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 TIMM29Q9BSF4 260 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 KPTNQ9Y664 436 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 HBA1P69905 142 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 RUNX3Q13761 415 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 BAK1Q16611 211 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 SLC35D3Q5M8T2 416 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 Q6ZTK2 550 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 RHOXF1Q8NHV9 184 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 ANKRD36A6QL64 1941 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 H2BFWTQ7Z2G1 175 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 GRINAQ7Z429 371 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 GNPNAT1Q96EK6 184 aaPredicted RBP14.39□□□□□ -0.11
HCFC1-201ENST00000310441 KIAA1456Q9P272 454 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 NXPH2O95156 264 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 CNIH1O95406 144 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 BAMBIQ13145 260 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 ENDOGQ14249 297 aaKnown RBP14.39□□□□□ -0.11
HCFC1-201ENST00000310441 TBC1D28Q2M2D7 210 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 OR6K3Q8NGY3 331 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 TRBV11-1A0A0K0K1C0 115 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 PNPP00491 289 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 RPL11P62913 178 aaKnown RBP14.39□□□□□ -0.11
HCFC1-201ENST00000310441 SIM1P81133 766 aaPredicted RBP14.39□□□□□ -0.11
HCFC1-201ENST00000310441 GGTA1PQ4G0N0 100 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 WRAP73Q9P2S5 460 aaPredicted RBP14.39□□□□□ -0.11
HCFC1-201ENST00000310441 MEIS3P2A8K0S8 358 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 SORDQ00796 357 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 CDC20BQ86Y33 519 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 GLIS1Q8NBF1 620 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 SLC22A12Q96S37 553 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 ADOQ96SZ5 270 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 ACPTQ9BZG2 426 aa14.39□□□□□ -0.11
HCFC1-201ENST00000310441 ZNF93P35789 620 aaPredicted RBP14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SIRPAP78324 504 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 KCNE4Q8WWG9 221 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 MOCOSQ96EN8 888 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SUSD5O60279 629 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.38□□□□□ -0.11
HCFC1-201ENST00000310441 FAM173AQ9BQD7 235 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SELENOIQ9C0D9 397 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 HTRA4P83105 476 aaPredicted RBP14.38□□□□□ -0.11
HCFC1-201ENST00000310441 C17orf67Q0P5P2 114 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SSR4P51571 173 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 RAB1AP62820 205 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 OPCMLQ14982 345 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 CD276Q5ZPR3 534 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 STT3BQ8TCJ2 826 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 GNB4Q9HAV0 340 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 PTRH2Q9Y3E5 179 aaKnown RBP14.38□□□□□ -0.11
HCFC1-201ENST00000310441 HEMK1Q9Y5R4 338 aaPredicted RBP14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SCN4AP35499 1836 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 RPE65Q16518 533 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 DPY19L2P2Q6ZN68 376 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms