RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CFHR1Q03591 330 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 EBPQ15125 230 aaKnown RBP10.49□□□□□ -0.73
PTPN2-201ENST00000309660 HYAL4Q2M3T9 481 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 PLXDC1Q8IUK5 500 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 DUSP19Q8WTR2 217 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 AKAP1Q92667 903 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPN2-201ENST00000309660 DAZLQ92904 295 aaKnown RBP10.49□□□□□ -0.73
PTPN2-201ENST00000309660 OMA1Q96E52 524 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 DPAGT1Q9H3H5 408 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 UBE2ZQ9H832 354 aaPredicted RBP10.49□□□□□ -0.73
PTPN2-201ENST00000309660 LIN7BQ9HAP6 207 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 A0A0A6YYJ9 748 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 SLC43A1O75387 559 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 AKR7A3O95154 331 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 IFI6P09912 130 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 UCHL1P09936 223 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 GAAP10253 952 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 PTBP1P26599 531 aaKnown RBP eCLIP10.49□□□□□ -0.731e-10■■■■□ 19.8
PTPN2-201ENST00000309660 SLC6A1P30531 599 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 NXPH1P58417 271 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 RPS4XP62701 263 aaKnown RBP10.49□□□□□ -0.73
PTPN2-201ENST00000309660 EFR3AQ14156 821 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 FCN2Q15485 313 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 ELAVL1Q15717 326 aaKnown RBP10.49□□□□□ -0.73
PTPN2-201ENST00000309660 TMPRSS12Q86WS5 348 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 CMTM4Q8IZR5 234 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 OR2T4Q8NH00 348 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 OR10AC1Q8NH08 325 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 OR5AK2Q8NH90 309 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 ZNF721Q8TF20 911 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 UBL7Q96S82 380 aaPredicted RBP10.49□□□□□ -0.73
PTPN2-201ENST00000309660 ITGB1BP2Q9UKP3 347 aa10.49□□□□□ -0.73
PTPN2-201ENST00000309660 AKR7A2O43488 359 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 GP1BBP13224 206 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 HLA-DMAP28067 261 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 CSF2RBP32927 897 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SNTB2Q13425 540 aaKnown RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 MELKQ14680 651 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 Q5BKY6 102 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 BICRALQ6AI39 1079 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 LRRN1Q6UXK5 716 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SLC19A3Q9BZV2 496 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 VN1R1Q9GZP7 353 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 FRG2CA6NGY1 282 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 FAM47E-STBD1D6RA91 191 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 UBL3O95164 117 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SPARCP09486 303 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 TACSTD2P09758 323 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 FAM157BP0CG42 384 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 TRAPPC2P0DI81 140 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 TRAPPC2BP0DI82 140 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 ABCD3P28288 659 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 GGTLC2Q14390 218 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 BTBD16Q32M84 506 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SLC35D3Q5M8T2 416 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 FAM122BQ7Z309 247 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SLITRK4Q8IW52 837 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 OR51A4Q8NGJ6 313 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 YIPF5Q969M3 257 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 ZC3HAV1LQ96H79 300 aaKnown RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 ZNF285Q96NJ3 590 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 ABRACLQ9P1F3 81 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 MRM2Q9UI43 246 aaKnown RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 KCNG2Q9UJ96 466 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 TRAV1-2A0A0B4J238 106 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 ITGA10O75578 1167 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 GATBO75879 557 aaKnown RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 DCNP07585 359 aaKnown RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 MAB21L1Q13394 359 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 RIN1Q13671 783 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 FAAP20Q6NZ36 180 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SLC43A2Q8N370 569 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SDR16C5Q8N3Y7 309 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 TSEN15Q8WW01 171 aaKnown RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 RGP1Q92546 391 aaPredicted RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 ATOH1Q92858 354 aaPredicted RBP10.48□□□□□ -0.73
PTPN2-201ENST00000309660 CREB3L1Q96BA8 519 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 NMNAT2Q9BZQ4 307 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SLITRK2Q9H156 845 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 RCE1Q9Y256 329 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 VDAC3Q9Y277 283 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 MMACHCQ9Y4U1 282 aa10.48□□□□□ -0.73
PTPN2-201ENST00000309660 SLC16A7O60669 478 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 OPN1LWP04000 364 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 TCRBP04435 133 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 ASAH2BP0C7U1 165 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 CAPZA2P47755 286 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 PITPNAQ00169 270 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 FAPQ12884 760 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 SMAD4Q13485 552 aaKnown RBP10.47□□□□□ -0.73
PTPN2-201ENST00000309660 SQSTM1Q13501 440 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 ETFDHQ16134 617 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 MEP1BQ16820 701 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 FNDC7Q5VTL7 733 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 SLC16A9Q7RTY1 509 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 ADIPOR1Q96A54 375 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 AMELYQ99218 206 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 DDOQ99489 341 aa10.47□□□□□ -0.73
PTPN2-201ENST00000309660 WWTR1Q9GZV5 400 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms