RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PLEKHF2Q9H8W4 249 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 PTTG3PQ9NZH4 202 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 SPO11Q9Y5K1 396 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 SETD1AO15047 1707 aaKnown RBP9.65□□□□□ -0.86
CLIP1-201ENST00000302528 OR2M5A3KFT3 312 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 TMEM212A6NML5 194 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 CER1O95813 267 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 CSF2RAP15509 400 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 NDUFB7P17568 137 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 MLLT11Q13015 90 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-201ENST00000302528 GLYR1Q49A26 553 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-201ENST00000302528 FAM122BQ7Z309 247 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 MDGA2Q7Z553 956 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 TCTE3Q8IZS6 198 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 OR5H6Q8NGV6 325 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 LRRC15Q8TF66 581 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 HHIPQ96QV1 700 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 ULBP3Q9BZM4 244 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 KIAA1456Q9P272 454 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 XKRY2A2RUG3 117 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF814B7Z6K7 855 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 I6L893 689 aaPredicted RBP9.65□□□□□ -0.87
CLIP1-201ENST00000302528 GPRIN2O60269 458 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF623O75123 536 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 WNT11O96014 354 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 PTGER1P34995 402 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 KIR2DL3P43628 341 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF90Q03938 601 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 PDZD11Q5EBL8 140 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 ZMAT1Q5H9K5 638 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 SLC35D2Q76EJ3 337 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 PARP16Q8N5Y8 322 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 C14orf79Q96F83 325 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 SLC29A1Q99808 456 aa9.65□□□□□ -0.87
CLIP1-201ENST00000302528 WDR83Q9BRX9 315 aaKnown RBP9.65□□□□□ -0.87
CLIP1-201ENST00000302528 ACOD1A6NK06 481 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 M0QZ24 198 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 WNT7BP56706 349 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 CLDN12P56749 244 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 MANEAQ5SRI9 462 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 DPPA2Q7Z7J5 298 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 CISD2Q8N5K1 135 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 UBAC2Q8NBM4 344 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 OR52E1Q8NGJ3 308 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 HLA-CQ95604 372 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 S1PR3Q99500 378 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SYT17Q9BSW7 474 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 RIMS4Q9H426 269 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 RANGRFQ9HD47 186 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SORBS2O94875 1100 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PRSS56P0CW18 603 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 DTYMKP23919 212 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 TNFRSF4P43489 277 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 GIPRP48546 466 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PXNP49023 591 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 RRADP55042 308 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 CDKN3Q16667 212 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 LETMD1Q6P1Q0 360 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 CPXM2Q8N436 756 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SCPEP1Q9HB40 452 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 NECAP2Q9NVZ3 263 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PIGLQ9Y2B2 252 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 OR5K3A6NET4 321 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 AQP7P3A6NL99 342 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 DBX1A6NMT0 343 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 F2P00734 622 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PSMB1P20618 241 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 DRD1P21728 446 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 GDNFP39905 211 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 AMTP48728 403 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 BIDP55957 195 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 HIST2H3AQ71DI3 136 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM135Q86UB9 458 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM25Q86YD3 366 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 TCEAL8Q8IYN2 117 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 OR10R2Q8NGX6 335 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 FIBINQ8TAL6 211 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PCNPQ8WW12 178 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 NAT6Q93015 286 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 CCDC74BQ96LY2 380 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 HES7Q9BYE0 225 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 EGLN1Q9GZT9 426 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 GRPP07492 148 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 GMPRP36959 345 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 GNB2P62879 340 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SLC35A1P78382 337 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 RAB33AQ14088 237 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 ISCA2Q86U28 154 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 OR51A4Q8NGJ6 313 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 OR2G3Q8NGZ4 309 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 GGHQ92820 318 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 BADQ92934 168 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SOX7Q9BT81 388 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 RAB6CQ9H0N0 254 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 DCAF13Q9NV06 445 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PRAMEF25A6NGN4 478 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms