RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SLC25A12O75746 678 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 DBIP07108 87 aaKnown RBP13.42□□□□□ -0.26
COL6A2-201ENST00000300527 POU4F2Q12837 409 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 SQSTM1Q13501 440 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 GAS6Q14393 721 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PRAMEF17Q5VTA0 474 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PRAMEF8Q5VWM4 474 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PRAMEF7Q5VXH5 474 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 OLFML2AQ68BL7 652 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 TBC1D3GQ6DHY5 549 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 NUDT18Q6ZVK8 323 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 DND1Q8IYX4 353 aaKnown RBP13.42□□□□□ -0.26
COL6A2-201ENST00000300527 NANPQ8TBE9 248 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 TRIM43Q96BQ3 446 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-201ENST00000300527 C3orf49Q96BT1 292 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 CRB3Q9BUF7 120 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PLEKHA1Q9HB21 404 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 OR6C68A6NDL8 312 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 OR6C65A6NJZ3 312 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 CTNSO60931 367 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 NID1P14543 1247 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 TYRP1P17643 537 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 CNR1P21554 472 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 BDKRB2P30411 391 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 PGDP52209 483 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 CCDC157Q569K6 752 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM106AQ96A25 262 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 ESRP2Q9H6T0 727 aaKnown RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 APMAPQ9HDC9 416 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 MBNL1Q9NR56 388 aaKnown RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 MED9Q9NWA0 146 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 FLRT3Q9NZU0 649 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 CNTRLQ7Z7A1 2325 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 GPANK1O95872 356 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 RAB40ALP0C0E4 278 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF28P17035 718 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 AQP2P41181 271 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 ARHGAP40Q5TG30 622 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 RPL13AP3Q6NVV1 102 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 POMZP3Q6PJE2 187 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 LRRTM1Q86UE6 522 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 CD163Q86VB7 1156 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF227Q86WZ6 799 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 OR1J2Q8NGS2 313 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 OR10G6Q8NH81 332 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 RAB40AQ8WXH6 277 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 MIB2Q96AX9 1013 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 LMAN2LQ9H0V9 348 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 COL4A3Q01955 1670 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 C13orf42A0A1B0GVH6 325 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 GLSO94925 669 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 VAMP1P23763 118 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 EMDP50402 254 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 SKP1P63208 163 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 SCRN3Q0VDG4 424 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 RHOUQ7L0Q8 258 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 SLC36A1Q7Z2H8 476 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 LDLRAD3Q86YD5 345 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 MCATQ8IVS2 390 aaKnown RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 RNF113BQ8IZP6 322 aaKnown RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 OR2L3Q8NG85 312 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 OR6N2Q8NGY6 317 aa13.41□□□□□ -0.26
COL6A2-201ENST00000300527 LINC00615Q96LM1 132 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-201ENST00000300527 TSPAN11A1L157 253 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 OR5H14A6NHG9 310 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 ADAM11O75078 769 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 NDUFB2O95178 105 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 SPI1P17947 270 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 MPGP29372 298 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 HSD17B2P37059 387 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 EIF2B5Q13144 721 aaKnown RBP13.4□□□□□ -0.26
COL6A2-201ENST00000300527 DUSP8Q13202 625 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 SRSF5Q13243 272 aaKnown RBP13.4□□□□□ -0.26
COL6A2-201ENST00000300527 DHCR24Q15392 516 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 ARHGAP11BQ3KRB8 267 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM71Q6P5X7 295 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 TMPRSS11FQ6ZWK6 438 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 SLC16A13Q7RTY0 426 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 OR6K3Q8NGY3 331 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 TINAGL1Q9GZM7 467 aaPredicted RBP13.4□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM82A0PJX8 343 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 TO15178 435 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 UBBP0CG47 229 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 UBCP0CG48 685 aaKnown RBP13.4□□□□□ -0.26
COL6A2-201ENST00000300527 AKAIN1P0CW23 69 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 PRSS3P35030 304 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 RPS27AP62979 156 aaKnown RBP13.4□□□□□ -0.26
COL6A2-201ENST00000300527 UBA52P62987 128 aaKnown RBP13.4□□□□□ -0.26
COL6A2-201ENST00000300527 DEFB103AP81534 67 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 STEAP1BQ6NZ63 245 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 MENTQ9BUN1 341 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 SLC25A32Q9H2D1 315 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 RXFP3Q9NSD7 469 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 TRAV14DV4A0A0A6YYC5 116 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 AGPAT2O15120 278 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 AKR7A3O95154 331 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms