RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SMIM12Q96EX1 92 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 MAP3K3Q99759 626 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 WWTR1Q9GZV5 400 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 CLEC2DQ9UHP7 191 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 OR10J4P0C629 311 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 BLVRBP30043 206 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-201ENST00000299333 CAMK2BQ13554 666 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 SLC36A2Q495M3 483 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 SIGLECL1Q8N7X8 197 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 LIPHQ8WWY8 451 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 TMEM18Q96B42 140 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 CPPED1Q9BRF8 314 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF586Q9NXT0 402 aa13.8□□□□□ -0.2
SCN3B-201ENST00000299333 ACKR3P25106 362 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 MRPL19P49406 292 aaKnown RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 ELLP55199 621 aaPredicted RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 Q499Y3 187 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 MDGA1Q8NFP4 955 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 OR51S1Q8NGJ8 323 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 LMF2Q9BU23 707 aaKnown RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 RNF167Q9H6Y7 350 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 STARD5Q9NSY2 213 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 NDRG3Q9UGV2 375 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 SLC35A3Q9Y2D2 325 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 DVL1O14640 695 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 RPA2P15927 270 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 CR2P20023 1033 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 CHRNB4P30926 498 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 DVL1P1P54792 670 aaPredicted RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 F2RL1P55085 397 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 TAF9Q16594 264 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 GDPD3Q7L5L3 318 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 PIANPQ8IYJ0 282 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 CTRCQ99895 268 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 SRRQ9GZT4 340 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 MRPS28Q9Y2Q9 187 aaKnown RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 PAPLNO95428 1278 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 SPRYD7Q5W111 196 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 RBMXL3Q8N7X1 1067 aaKnown RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 HSD17B8Q92506 261 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 LPAR4Q99677 370 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 NKX3-1Q99801 234 aaPredicted RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 NUDT22Q9BRQ3 303 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF331Q9NQX6 463 aaPredicted RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF816-ZNF321PA0A0X1KG74 233 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 RPL29P47914 159 aaKnown RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 HAGHQ16775 308 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 GCNT2Q8N0V5 402 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF321PQ8N8H1 164 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 LFNGQ8NES3 379 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 OR2D3Q8NGH3 330 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 EXTL1Q92935 676 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 GPR174Q9BXC1 333 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 CYB5BO43169 146 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 AKR7A2O43488 359 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 SOD2P04179 222 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 FGF7P21781 194 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 MTCP1P56278 107 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 CATR1Q13166 79 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 LCTLQ6UWM7 567 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 SYT9Q86SS6 491 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF251Q9BRH9 671 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 HRASLSQ9HDD0 168 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 MED9Q9NWA0 146 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 SLC2A8Q9NY64 477 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 MTCH1Q9NZJ7 389 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 APOBEC3BQ9UH17 382 aaKnown RBP13.79□□□□□ -0.2
SCN3B-201ENST00000299333 MYO10Q9HD67 2058 aa13.79□□□□□ -0.2
SCN3B-201ENST00000299333 JUNBP17275 347 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-201ENST00000299333 POU3F1Q03052 451 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-201ENST00000299333 PDE7AQ13946 482 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 ELAVL3Q14576 367 aaKnown RBP13.78□□□□□ -0.2
SCN3B-201ENST00000299333 AMIGO3Q86WK7 504 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 CHST14Q8NCH0 376 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 SLC24A4Q8NFF2 622 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 STEAP1Q9UHE8 339 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 TRAPPC2LQ9UL33 140 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF840PA6NDX5 716 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 H7BYZ3 331 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 MMP2P08253 660 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 GIPP09681 153 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-201ENST00000299333 H2AFB1P0C5Y9 115 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 CD70P32970 193 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 HHEXQ03014 270 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 EXOSC2Q13868 293 aaKnown RBP13.78□□□□□ -0.2
SCN3B-201ENST00000299333 SMUG1Q53HV7 270 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 Q5PR19 223 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 UBAC2Q8NBM4 344 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 TMED6Q8WW62 240 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 ZNF583Q96ND8 569 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 C1orf198Q9H425 327 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-201ENST00000299333 PDGFBP01127 241 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-201ENST00000299333 CLEC3BP05452 202 aa13.78□□□□□ -0.2
SCN3B-201ENST00000299333 SLC2A1P11166 492 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms