RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 LRP11Q86VZ4 500 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF440Q8IYI8 595 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 LRRC34Q8IZ02 419 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF786Q8N393 782 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 TRIML2Q8N7C3 387 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 MFSD8Q8NHS3 518 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 SLC38A5Q8WUX1 472 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 NEU4Q8WWR8 484 aaPredicted RBP8□□□□□ -1.13
CNOT9-202ENST00000295701 TAAR8Q969N4 342 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 TMEM19Q96HH6 336 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 PLA2G12AQ9BZM1 189 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 LINC00470Q9BZP3 86 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 NARFLQ9H6Q4 476 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 WDR55Q9H6Y2 383 aaPredicted RBP8□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF442Q9H7R0 627 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 LPAR2Q9HBW0 351 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 CRLF2Q9HC73 371 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 MYEF2Q9P2K5 600 aaKnown RBP8□□□□□ -1.13
CNOT9-202ENST00000295701 HAO1Q9UJM8 370 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 RASD1Q9Y272 281 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 DSPPQ9NZW4 1301 aa8□□□□□ -1.13
CNOT9-202ENST00000295701 RPL36A-HNRNPH2H7BZ11 118 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 RFXANKO14593 260 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 BIRC5O15392 142 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 VAMP5O95183 116 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 AHSA1O95433 338 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 KRT75O95678 551 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 HLA-HP01893 362 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 HPXP02790 462 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 KITP10721 976 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 HLA-DOBP13765 273 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF43P17038 809 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 EPHA3P29320 983 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 CAPZA2P47755 286 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 AQP5P55064 265 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 DSTNP60981 165 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 COPZ1P61923 177 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 IL1RL1Q01638 556 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 PIGFQ07326 219 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 STX3Q13277 289 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 SNTB2Q13425 540 aaKnown RBP7.99□□□□□ -1.13
CNOT9-202ENST00000295701 DAG1Q14118 895 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 MAD2L1BPQ15013 274 aaPredicted RBP7.99□□□□□ -1.13
CNOT9-202ENST00000295701 DPY19L1Q2PZI1 675 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 ELFN2Q5R3F8 820 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 CARD17Q5XLA6 110 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 OGFOD2Q6N063 350 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 C12orf54Q6X4T0 127 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 COMTD1Q86VU5 262 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 MEX3DQ86XN8 651 aaKnown RBP7.99□□□□□ -1.13
CNOT9-202ENST00000295701 FAM169BQ8N8A8 192 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 STK35Q8TDR2 534 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 AENQ8WTP8 325 aaKnown RBP7.99□□□□□ -1.13
CNOT9-202ENST00000295701 VPS33AQ96AX1 596 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF75AQ96N20 296 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 ANKRD27Q96NW4 1050 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 OXGR1Q96P68 337 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 SYT3Q9BQG1 590 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 EMC6Q9BV81 110 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 SPATA9Q9BWV2 254 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 MRPL37Q9BZE1 423 aaKnown RBP7.99□□□□□ -1.13
CNOT9-202ENST00000295701 METTL17Q9H7H0 456 aaPredicted RBP7.99□□□□□ -1.13
CNOT9-202ENST00000295701 DYNLRB1Q9NP97 96 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 B3GNT2Q9NY97 397 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 P2RX2Q9UBL9 471 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 FZR1Q9UM11 496 aa7.99□□□□□ -1.13
CNOT9-202ENST00000295701 IGKV1D-42A0A075B6H8 117 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 MS4A18H0YCH9 400 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 M0R3G1 203 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 TRAF3IP2O43734 574 aaPredicted RBP7.98□□□□□ -1.13
CNOT9-202ENST00000295701 SLC43A1O75387 559 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 SNUPNO95149 360 aaKnown RBP7.98□□□□□ -1.13
CNOT9-202ENST00000295701 HPRP00739 348 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 CD79AP11912 226 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 GRPRP30550 384 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 ALDH3B1P43353 468 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 ANXA11P50995 505 aaKnown RBP7.98□□□□□ -1.13
CNOT9-202ENST00000295701 CRISP3P54108 245 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 BST1Q10588 318 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 C1DQ13901 141 aaKnown RBP7.98□□□□□ -1.13
CNOT9-202ENST00000295701 LARS2Q15031 903 aaKnown RBP7.98□□□□□ -1.13
CNOT9-202ENST00000295701 MS4A18Q3C1V0 323 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 KRT71Q3SY84 523 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF311Q5JNZ3 666 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 RNF220Q5VTB9 566 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 TMEM123Q8N131 208 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 GPR137CQ8N3F9 429 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 CLDND2Q8NHS1 167 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.98□□□□□ -1.13
CNOT9-202ENST00000295701 MAL2Q969L2 176 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 YIPF5Q969M3 257 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 TXNDC15Q96J42 360 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 OR2M2Q96R28 347 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 PAIP2Q9BPZ3 127 aaKnown RBP7.98□□□□□ -1.13
CNOT9-202ENST00000295701 LIN7BQ9HAP6 207 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 TPT1P8Q9HAU6 139 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 TREM2Q9NZC2 230 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 REV1Q9UBZ9 1251 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 CMAHPQ9Y471 501 aa7.98□□□□□ -1.13
CNOT9-202ENST00000295701 A0A0G2JPF8 293 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms