RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ZNF223Q9UK11 482 aaPredicted RBP12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 PCDHGA9Q9Y5G4 932 aaKnown RBP12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 IER3IP1Q9Y5U9 82 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 TRBV23-1A0A0A0MS06 115 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 TEX13CA0A0J9YWL9 993 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 MEIS3P1A6NDR6 274 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 ARHGEF9O43307 516 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 IGKV1D-16P01601 117 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 UGT2B7P16662 529 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 HLA-DMAP28067 261 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 SLC6A1P30531 599 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 BMP8BP34820 402 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 RPL4P36578 427 aaKnown RBP12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 TRA2BP62995 288 aaKnown RBP12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 PLA2G7Q13093 441 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 SLC36A2Q495M3 483 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 C9orf50Q5SZB4 431 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 METAP1DQ6UB28 335 aaPredicted RBP12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 ZNF767PQ75MW2 155 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 BMP8AQ7Z5Y6 402 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 OR52R1Q8NGF1 315 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 ZNF431Q8TF32 576 aaPredicted RBP12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 PGLYRP3Q96LB9 341 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 ACTR6Q9GZN1 396 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 NT5DC2Q9H857 520 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 HCN3Q9P1Z3 774 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 KLK11Q9UBX7 282 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 IL19Q9UHD0 177 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 NPFFR2Q9Y5X5 522 aa12.16□□□□□ -0.46
KCNIP3-201ENST00000295225 A0A1B0GWA3 101 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 TRABD2BA6NFA1 517 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 PRR32B1ATL7 298 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 EFSO43281 561 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 SEC14L5O43304 696 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 C1QBP02746 253 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 NR2C1P13056 603 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 AHCYP23526 432 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 ERP29P30040 261 aaKnown RBP12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 RP1P56715 2156 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 RGS1Q08116 209 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 TMEM164Q5U3C3 297 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 HBMQ6B0K9 141 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 FCRL6Q6DN72 434 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 RNF44Q7L0R7 432 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 RANBP3LQ86VV4 465 aaPredicted RBP12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 FANCMQ8IYD8 2048 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 TOMM5Q8N4H5 51 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 ZNF511Q8NB15 262 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 SLC25A36Q96CQ1 311 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 B3GNT2Q9NY97 397 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 SLCO1B1Q9Y6L6 691 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 STX11O75558 287 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 CCR4P51679 360 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 RPS21P63220 83 aaKnown RBP12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 ST3GAL2Q16842 350 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 PLA1AQ53H76 456 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 HEPHL1Q6MZM0 1159 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 FIGLAQ6QHK4 219 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 OR2L13Q8N349 312 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 C9orf62Q8N4C0 152 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 LGALS14Q8TCE9 139 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 ST8SIA4Q92187 359 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 OR1F2PQ96R84 312 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 CACNG6Q9BXT2 260 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 OR10A4Q9H209 315 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 SLC17A4Q9Y2C5 497 aa12.15□□□□□ -0.46
KCNIP3-201ENST00000295225 BLOC1S5-TXNDC5H3BN57 136 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 TOX3O15405 576 aaPredicted RBP12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 B3GALT2O43825 422 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 TRIM3O75382 744 aaPredicted RBP12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 MT-ND5P03915 603 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 TCRBP04435 133 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 RAB3BP20337 219 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 ERVK-25P63136 954 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 DUSP8Q13202 625 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 ARHGAP11BQ3KRB8 267 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 MYADMQ96S97 322 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 GTPBP2Q9BX10 602 aaKnown RBP12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 GPN3Q9UHW5 284 aaPredicted RBP12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 MED31Q9Y3C7 131 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 ASPMQ8IZT6 3477 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 EML5Q05BV3 1969 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 FAM86C2PA6NEL3 165 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 I3L521 148 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 K7EQS6 105 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 SSNA1O43805 119 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 FBP1P09467 338 aa12.14□□□□□ -0.47
KCNIP3-201ENST00000295225 TMIGD3P0DMS9 266 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms