RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FASLGP48023 281 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 KCNJ5P48544 419 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 NOVA1P51513 510 aaKnown RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 EMP2P54851 167 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 TAS2R46P59540 309 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ISL1P61371 349 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 DPTQ07507 201 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 BEX5Q5H9J7 111 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLX4IPQ5VYV7 408 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 NXNL2Q5VZ03 156 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 KDM4DQ6B0I6 523 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 FAM71E2Q8N5Q1 922 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF611Q8N823 705 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR52N1Q8NH53 320 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SCARB1Q8WTV0 552 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 UBTD2Q8WUN7 234 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 UQCC2Q9BRT2 126 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 BTBD2Q9BX70 525 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 NMNAT2Q9BZQ4 307 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 INIPQ9NRY2 104 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ADAM29Q9UKF5 820 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SNX11Q9Y5W9 270 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 hCG_1807616A0A1W2PRN6 198 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 CD300LBA8K4G0 201 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 J3KTA2 159 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SHOXO15266 292 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SULT1B1O43704 296 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 FBXO24O75426 580 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 NCR1O76036 304 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 KCNK5O95279 499 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 CCR9P51686 369 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 UBE2KP61086 200 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 C6orf132Q5T0Z8 1188 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 IDO2Q6ZQW0 420 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 MEX3DQ86XN8 651 aaKnown RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF582Q96NG8 517 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SMIM3Q9BZL3 60 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLCO5A1Q9H2Y9 848 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 LDAHQ9H6V9 325 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SMCO4Q9NRQ5 59 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 CUL9Q8IWT3 2517 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 FZD6O60353 706 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 RAD1O60671 282 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 HBE1P02100 147 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 IDUAP35475 653 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 PIGAP37287 484 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 METAP1P53582 386 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 TAS2R30P59541 319 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 GPR18Q14330 331 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 CTSL3PQ5NE16 218 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 TMEM200AQ86VY9 491 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF480Q8WV37 535 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 HAS2Q92819 552 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SORCS2Q96PQ0 1159 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR7D2Q96RA2 312 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ATP6V1G2-DDX39BF2Z307 99 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 HOXB5P09067 269 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 GPX2P18283 190 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 HIST1H1TP22492 207 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SIRPAP78324 504 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 HTD2P86397 168 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 HOXC5Q00444 222 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 PLA2G7Q13093 441 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 NR0B2Q15466 257 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 RAET1LQ5VY80 246 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 MEX3BQ6ZN04 569 aaKnown RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 CCDC71Q8IV32 467 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SIAH3Q8IW03 269 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 SUMF1Q8NBK3 374 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 LGALS14Q8TCE9 139 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 TM9SF4Q92544 642 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 CDS1Q92903 461 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 RLIMQ9NVW2 624 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF443Q9Y2A4 671 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 PTPRZ1P23471 2315 aaPredicted RBP10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLC9B1P1A6NJY1 282 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF883P0CG24 379 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 PRAMEF8Q5VWM4 474 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 PRAMEF7Q5VXH5 474 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 KCNIP4Q6PIL6 250 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 ABI3BPQ7Z7G0 1075 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 L3MBTL4Q8NA19 623 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 DNAAF1Q8NEP3 725 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR51Q1Q8NH59 317 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 ABHD4Q8TB40 342 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 GHSRQ92847 366 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLAMF9Q96A28 289 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 SAMD10Q9BYL1 202 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF160Q9HCG1 818 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 ETV7Q9Y603 341 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 CSO75390 466 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 HOXC4P09017 264 aaPredicted RBP10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 SNU13P55769 128 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 SNRPGP62308 76 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 CDC20Q12834 499 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR1Q1Q15612 314 aa10.93□□□□□ -0.66
SYNGAP1-201ENST00000293748 HIST2H3PS2Q5TEC6 136 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms