RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SFXN4Q6P4A7 337 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 LILRA6Q6PI73 481 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 LSRQ86X29 649 aaPredicted RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SLC35F2Q8IXU6 374 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 LGALS14Q8TCE9 139 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 GPR148Q8TDV2 347 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SLC25A46Q96AG3 418 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 PARP12Q9H0J9 701 aaKnown RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 CPNE7Q9UBL6 633 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 TMEM82A0PJX8 343 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 MAN2B1O00754 1011 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 DVL2O14641 736 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 CYTIPO60759 359 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 RAD51DO75771 328 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 HBQ1P09105 142 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 GP1BBP13224 206 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 RBMS1P29558 406 aaKnown RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 PRKAR1BP31321 381 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 GPR143P51810 404 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 SNU13P55769 128 aaKnown RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 MRPS10P82664 201 aaKnown RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 CD276Q5ZPR3 534 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 MBOAT2Q6ZWT7 520 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 MFSD9Q8NBP5 474 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 OR13C5Q8NGS8 318 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 TERB2Q8NHR7 220 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 SFXN5Q8TD22 340 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 NPRL2Q8WTW4 380 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ADOQ96SZ5 270 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM231Q9H6L2 316 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 A0A0B4J203 849 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 CPT2P23786 658 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ASAH1Q13510 395 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 RBMS2Q15434 407 aaKnown RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 FXNQ16595 210 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM52BQ4KMG9 183 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 SOHLH1Q5JUK2 328 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 EOGTQ5NDL2 527 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF793Q6ZN11 406 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 PGAP1Q75T13 922 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 PLPP6Q8IY26 295 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ORAI1Q96D31 301 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 NMNAT3Q96T66 252 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 PDCD1LG2Q9BQ51 273 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 SAMD10Q9BYL1 202 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 GDE1Q9NZC3 331 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 PPIL1Q9Y3C6 166 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ATRXP46100 2492 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 UBL3O95164 117 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ARL3P36405 182 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 NUDT1P36639 197 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 FOXK2Q01167 660 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF836Q6ZNA1 936 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 OR2T4Q8NH00 348 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 G6PC3Q9BUM1 346 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ZMAT3Q9HA38 289 aaKnown RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 THAP10Q9P2Z0 257 aaPredicted RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 OPN1LWP04000 364 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 SYPP08247 313 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 OR8G3PP0DMU2 310 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 EBPQ15125 230 aaKnown RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 RNF151Q2KHN1 245 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 BTBD2Q9BX70 525 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 C6orf106Q9H6K1 298 aaPredicted RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ISG20L2Q9H9L3 353 aaKnown RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 ICKQ9UPZ9 632 aa11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 GPR55Q9Y2T6 319 aaPredicted RBP11.58□□□□□ -0.56
SLC6A1-201ENST00000287766 BRCA1P38398 1863 aaKnown RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 MYO16Q9Y6X6 1858 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 AGAP14A8MT82 685 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 KIR2DS3Q14952 304 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 AGERQ15109 404 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 MPEG1Q2M385 716 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 AWAT2Q6E213 333 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 LAIR2Q6ISS4 152 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 PARM1Q6UWI2 310 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 NDUFAF7Q7L592 441 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 GPR155Q7Z3F1 870 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 OR13C9Q8NGT0 318 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 HAS2Q92819 552 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 HHIPL1Q96JK4 782 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 ELF4Q99607 663 aaPredicted RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 A4GNTQ9UNA3 340 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 SLC35A3Q9Y2D2 325 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 RHBDD3Q9Y3P4 386 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 CHST2Q9Y4C5 530 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 A0A1B0GWA3 101 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 D6RAR5 112 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 ANXA7P20073 488 aaKnown RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 MEX3BQ6ZN04 569 aaKnown RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 RASGRP3Q8IV61 690 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 LINC01555Q8NAE3 123 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 HPSE2Q8WWQ2 592 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 NDUFB11Q9NX14 153 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms