RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PRMT8Q9NR22 394 aaPredicted RBP17.05■□□□□ 0.32
PCDH1-201ENST00000287008 M0R082 166 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 OLFM2O95897 454 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 PTTG1O95997 202 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 DUSP7Q16829 419 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 OR2T35Q8NGX2 323 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 NDNFQ8TB73 568 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 FNDC9Q8TBE3 224 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 CENPOQ9BU64 300 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 NDRG4Q9ULP0 352 aaKnown RBP17.05■□□□□ 0.32
PCDH1-201ENST00000287008 LSM5Q9Y4Y9 91 aaKnown RBP17.05■□□□□ 0.32
PCDH1-201ENST00000287008 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 H3BMQ9 156 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 IGHV3-9P01782 118 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 HLA-DMAP28067 261 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 OR56B1Q8NGI3 324 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 C16orf52Q8NHV5 167 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 RNF128Q8TEB7 428 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 C1QTNF3Q9BXJ4 246 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 TRAPPC2LQ9UL33 140 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 DDX60LQ5H9U9 1706 aaKnown RBP17.05■□□□□ 0.32
PCDH1-201ENST00000287008 GAPDHSO14556 408 aaPredicted RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 MT-CO2P00403 227 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 CD53P19397 219 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 RHEBQ15382 184 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 CA13Q8N1Q1 262 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 ACBD4Q8NC06 268 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 OR7G2Q8NG99 324 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 GHSRQ92847 366 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 GIMAP5Q96F15 307 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 SLC35A4Q96G79 324 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 HRASLS5Q96KN8 279 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 AMBRA1Q9C0C7 1298 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 SDHAF2Q9NX18 166 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 GABRPO00591 440 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 EIF2S3P41091 472 aaKnown RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 EIF3IQ13347 325 aaKnown RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 ARHGAP11BQ3KRB8 267 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 LRRC28Q86X40 367 aaPredicted RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 THAP7Q9BT49 309 aaPredicted RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 NOX4Q9NPH5 578 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 hCG_1809904A0A1W2PP81 198 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 A0A1W2PPE2 198 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 A0A1W2PR64 198 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 A0A1W2PRV1 198 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 TMEM221A6NGB7 291 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 NOTOA8MTQ0 251 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF701M0R085 212 aaPredicted RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 LGI1O95970 557 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 METAP1DQ6UB28 335 aaPredicted RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 PGAP1Q75T13 922 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 LIPHQ8WWY8 451 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 RFPL3O75679 317 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 CCL7P80098 99 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 SPEM2Q0P670 501 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 SELENBP1Q13228 472 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 Q499Y3 187 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 LCN10Q6JVE6 187 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 FCRLAQ7L513 359 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 KCNG3Q8TAE7 436 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 ZC3HAV1LQ96H79 300 aaKnown RBP17.04■□□□□ 0.32
PCDH1-201ENST00000287008 TBCCD1Q9NVR7 557 aa17.04■□□□□ 0.32
PCDH1-201ENST00000287008 NXPH2O95156 264 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 BCORP1Q8N888 145 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 NRG4Q8WWG1 115 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 DECR2Q9NUI1 292 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 PAQR5Q9NXK6 330 aaPredicted RBP17.03■□□□□ 0.32
PCDH1-201ENST00000287008 TBC1D28Q2M2D7 210 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 HYAL4Q2M3T9 481 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 SAXO2Q658L1 398 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 DHRS13Q6UX07 377 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 OR5D18Q8NGL1 313 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 PLA2G2FQ9BZM2 168 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 HAO2Q9NYQ3 351 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 ARHGAP33O14559 1287 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 PRAF2O60831 178 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 KCNK2O95069 426 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 MYF5P13349 255 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 HTR2AP28223 471 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 RPL27P61353 136 aaKnown RBP17.03■□□□□ 0.32
PCDH1-201ENST00000287008 RIPPLY1Q0D2K3 151 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 PIWIL3Q7Z3Z3 882 aaKnown RBP17.03■□□□□ 0.32
PCDH1-201ENST00000287008 GLB1L2Q8IW92 636 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 PM20D2Q8IYS1 436 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 SLC15A4Q8N697 577 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 C11orf40Q8WZ69 217 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 HSD17B8Q92506 261 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 EDARQ9UNE0 448 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 CACNG2Q9Y698 323 aa17.03■□□□□ 0.32
PCDH1-201ENST00000287008 A6NIN4 97 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 FZD7O75084 574 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 IL7P13232 177 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 HTR1FP30939 366 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 METAP1P53582 386 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 TAS2R19P59542 299 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 AKR1C8PQ5T2L2 129 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 OR5M1Q8NGP8 315 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 RASD2Q96D21 266 aa17.02■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF582Q96NG8 517 aaPredicted RBP17.02■□□□□ 0.32
PCDH1-201ENST00000287008 TAAR9Q96RI9 348 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms