RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 PODNL1Q6PEZ8 512 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 VHLLQ6RSH7 139 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 TMEM123Q8N131 208 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 NUP37Q8NFH4 326 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 SORCS2Q96PQ0 1159 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 RSPO3Q9BXY4 272 aaPredicted RBP12.86□□□□□ -0.35
RPS3-201ENST00000278572 ZNF442Q9H7R0 627 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 B3GAT2Q9NPZ5 323 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 CDC42EP3Q9UKI2 254 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 USP22Q9UPT9 525 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 NDUFAF1Q9Y375 327 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 NOX1Q9Y5S8 564 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 FBN3Q75N90 2809 aa12.86□□□□□ -0.35
RPS3-201ENST00000278572 LY6HO94772 140 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 MFN2O95140 757 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 ERCC1P07992 297 aaPredicted RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 VIMP08670 466 aaKnown RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 CALCRP30988 508 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 CAPZA2P47755 286 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 PPOXP50336 477 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 IDH3GP51553 393 aaPredicted RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 PCBP3P57721 371 aaKnown RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 PUDPQ08623 228 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 NPRL3Q12980 569 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 PMS2P3Q13401 168 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 ADIPOQQ15848 244 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 RUNDC3AQ59EK9 446 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 ZNF613Q6PF04 617 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 DLEU7Q6UYE1 221 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 SNX32Q86XE0 403 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 DPP10Q8N608 796 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 C10orf53Q8N6V4 93 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 SMYD1Q8NB12 490 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 IL17RDQ8NFM7 739 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 NANOS1Q8WY41 292 aaKnown RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 VRK1Q99986 396 aaPredicted RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 SIKE1Q9BRV8 207 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 TMEM43Q9BTV4 400 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
RPS3-201ENST00000278572 MRPL39Q9NYK5 338 aaKnown RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 FBN1P35555 2871 aaKnown RBP12.85□□□□□ -0.35
RPS3-201ENST00000278572 M0R3G1 203 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 CHP2O43745 196 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 MT-ATP6P00846 226 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 BGLAPP02818 100 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 MDH1P40925 334 aaKnown RBP12.84□□□□□ -0.35
RPS3-201ENST00000278572 GZMKP49863 264 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 CDH12P55289 794 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 MTPNP58546 118 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 CARTPTQ16568 116 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 CARD17Q5XLA6 110 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 CYB5R2Q6BCY4 276 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 PTOV1Q86YD1 416 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 SLC30A8Q8IWU4 369 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 TSPEARQ8WU66 669 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 LRR1Q96L50 414 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 ANKRD27Q96NW4 1050 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 CGREF1Q99674 301 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 MCHR1Q99705 422 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 TMEM120AQ9BXJ8 343 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 ZNF385DQ9H6B1 395 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 CCDC134Q9H6E4 229 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 SEC61A2Q9H9S3 476 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 LPAR3Q9UBY5 353 aa12.84□□□□□ -0.35
RPS3-201ENST00000278572 IGHV2OR16-5A0A0B4J2B6 119 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 ZNF726A6NNF4 738 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 M0R3H8 397 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 SEC14L2O76054 403 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 HPRP00739 348 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 C8BP07358 591 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 CELA3BP08861 270 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 FAM157CP0CG43 387 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 IGHV4-31P0DP07 118 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 ZNF16P17020 682 aaPredicted RBP12.83□□□□□ -0.36
RPS3-201ENST00000278572 NPR2P20594 1047 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 NR4A2P43354 598 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 GYS2P54840 703 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
RPS3-201ENST00000278572 NFYCQ13952 458 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 GGTLC2Q14390 218 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 INTS11Q5TA45 600 aaKnown RBP12.83□□□□□ -0.36
RPS3-201ENST00000278572 PXKQ7Z7A4 578 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 PATL1Q86TB9 770 aaKnown RBP12.83□□□□□ -0.36
RPS3-201ENST00000278572 MDP1Q86V88 176 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 ZNF540Q8NDQ6 660 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 OR6N1Q8NGY5 312 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 OR5J2Q8NH18 312 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 ZNF837Q96EG3 531 aaPredicted RBP12.83□□□□□ -0.36
RPS3-201ENST00000278572 MOGAT1Q96PD6 335 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 ARHGDIGQ99819 225 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 ULBP2Q9BZM5 246 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 RAB1BQ9H0U4 201 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 MED29Q9NX70 200 aa12.83□□□□□ -0.36
RPS3-201ENST00000278572 POFUT2Q9Y2G5 429 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms