RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 AOC1P19801 751 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 PGCP20142 388 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 BCKDHBP21953 392 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 UGT1A4P22310 534 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 GPX3P22352 226 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 AADACP22760 399 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 DCKP27707 260 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 HSD11B1P28845 292 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 HNRNPH1P31943 449 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 STX2P32856 288 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 UGT1A3P35503 534 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ACVR1BP36896 505 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 SLC26A3P40879 764 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 TAF6P49848 677 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 GNG10P50151 68 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 PLK1P53350 603 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 HNRNPH2P55795 449 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 CLDN17P56750 224 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 NTHL1P78549 312 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 IL9RQ01113 521 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 OC90Q02509 493 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 KLC1Q07866 573 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 MFGE8Q08431 387 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 RBBP4Q09028 425 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 TWF1Q12792 350 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 HTR4Q13639 388 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 SERTAD2Q14140 314 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 GRB7Q14451 532 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 TRIP6Q15654 476 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 PHKG1Q16816 387 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 PPP1R3AQ16821 1122 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 PAN3Q58A45 887 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 ENTPD8Q5MY95 495 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 LY6G6FQ5SQ64 297 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 UTF1Q5T230 341 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 MORN5Q5VZ52 161 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 C9orf57Q5W0N0 161 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ADAM5Q6NVV9 412 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 FAM122CQ6P4D5 195 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 BHLHB9Q6PI77 547 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 SHC4Q6S5L8 630 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 PAQR6Q6TCH4 344 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 PARM1Q6UWI2 310 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 C19orf35Q6ZS72 473 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 Q75L30 129 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 SLC16A14Q7RTX9 510 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 NET1Q7Z628 596 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 TMEM17Q86X19 198 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ZFAND4Q86XD8 727 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CRLF3Q8IUI8 442 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 APRG1Q8IVJ8 170 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 GPALPP1Q8IXQ4 340 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 DCP1BQ8IZD4 617 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 IQCKQ8N0W5 287 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 GPD1LQ8N335 351 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 FAM89BQ8N5H3 189 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CPSF7Q8N684 471 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 LRRC52Q8N7C0 313 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CCDC112Q8NEF3 446 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ACVR1CQ8NER5 493 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 B3GNT7Q8NFL0 401 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ITFG1Q8TB96 612 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 LGALS14Q8TCE9 139 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CA5BP1Q8WTZ4 195 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 C2orf15Q8WU43 125 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 FGF13Q92913 245 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 RPL36ALQ969Q0 106 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 CPNE4Q96A23 557 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 ELSPBP1Q96BH3 223 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CEP19Q96LK0 163 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 FCRL5Q96RD9 977 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ULBP2Q9BZM5 246 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ARRDC1-AS1Q9H2J1 176 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 KIR3DX1Q9H7L2 352 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ANKHQ9HCJ1 492 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 MLXIPLQ9NP71 852 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CNGB3Q9NQW8 809 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 SAMSN1Q9NSI8 373 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 GPATCH2LQ9NWQ4 482 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 C2orf42Q9NWW7 574 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 USE1Q9NZ43 259 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CD274Q9NZQ7 290 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ZNF282Q9UDV7 671 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 DAPK2Q9UIK4 370 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 C3orf18Q9UK00 162 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 NXT1Q9UKK6 140 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 MMP24Q9Y5R2 645 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 AUP1Q9Y679 476 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 TCF20Q9UGU0 1960 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 CHD9Q3L8U1 2897 aa4□□□□□ -1.77
CD44-202ENST00000278385 A0A1B0GTI1 187 aa4□□□□□ -1.77
CD44-202ENST00000278385 TCRBV5S1A1TA0A578 114 aa4□□□□□ -1.77
CD44-202ENST00000278385 E5RI56 91 aa4□□□□□ -1.77
CD44-202ENST00000278385 F8VP50 259 aa4□□□□□ -1.77
CD44-202ENST00000278385 H3BMH7 237 aa4□□□□□ -1.77
CD44-202ENST00000278385 SH2D1BO14796 132 aa4□□□□□ -1.77
CD44-202ENST00000278385 TAPBPO15533 448 aa4□□□□□ -1.77
CD44-202ENST00000278385 AQP9O43315 295 aa4□□□□□ -1.77
CD44-202ENST00000278385 PCDH7O60245 1069 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms