RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 AK4P27144 223 aaPredicted RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 PNLIPRP2P54317 469 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 OR52W1Q6IF63 320 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 USP53Q70EK8 1073 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 RNF44Q7L0R7 432 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 ZNRF4Q8WWF5 429 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 VOPP1Q96AW1 172 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 TSSK2Q96PF2 358 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.76□□□□□ -0.53
HERC6-202ENST00000273960 PRR13Q9NZ81 148 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 IKZF2Q9UKS7 526 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 KIF26AQ9ULI4 1882 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 TBC1D3BA6NDS4 549 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 NAP1L6A6NFF2 107 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 M0R036 132 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 GRM6O15303 877 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 GSTZ1O43708 216 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 AQP8O94778 261 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 METAP1P53582 386 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 EIF2B1Q14232 305 aaKnown RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 CDK5R1Q15078 307 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 NUDT13Q86X67 352 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 INO80EQ8NBZ0 244 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 STOML3Q8TAV4 291 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 TM7SF3Q9NS93 570 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 ST6GALNAC2Q9UJ37 374 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 ENTPD4Q9Y227 616 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 NLRC5Q86WI3 1866 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 RFPL4AA6NLU0 287 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 SNRPGP15A8MWD9 76 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 ZNF879B4DU55 563 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 RFPL4AL1F8VTS6 287 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 NDUFS4O43181 175 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 SNAPINO95295 136 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 CXCL10P02778 98 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 ELFN1P0C7U0 828 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 PPM1FP49593 454 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 PCBP4P57723 403 aaKnown RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 HTRA4P83105 476 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 LTBQ06643 244 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 GFOD2Q3B7J2 385 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 JMJD6Q6NYC1 403 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 TTLL10Q6ZVT0 673 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 ANKRD33Q7Z3H0 272 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 JAZF1Q86VZ6 243 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 ZNF511Q8NB15 262 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 OR10AC1Q8NH08 325 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 OVCA2Q8WZ82 227 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 GLYATL1Q969I3 302 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 LCORQ96JN0 433 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 ADAP2Q9NPF8 381 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 FBXO34Q9NWN3 711 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 ANKRD10Q9NXR5 420 aa11.75□□□□□ -0.53
HERC6-202ENST00000273960 GPN3Q9UHW5 284 aaPredicted RBP11.75□□□□□ -0.53
HERC6-202ENST00000273960 MED19A0JLT2 244 aaPredicted RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 CTNSO60931 367 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 ZIC2O95409 532 aaPredicted RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 HLA-AP01891 365 aaKnown RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 CTSAP10619 480 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 PGAM2P15259 253 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 DPP4P27487 766 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 FAUP35544 74 aaKnown RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 F2RL1P55085 397 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 AIMP2Q13155 320 aaKnown RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 SLC36A1Q7Z2H8 476 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 CDK20Q8IZL9 346 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 EIF4E3Q8N5X7 224 aaKnown RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 WDSUB1Q8N9V3 476 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 IRF7Q92985 503 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 CNRIP1Q96F85 164 aaPredicted RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 PTCHD1Q96NR3 888 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 ZNF350Q9GZX5 532 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 LAT2Q9GZY6 243 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 KCNK7Q9Y2U2 307 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 WDR45Q9Y484 360 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 POP4O95707 220 aaKnown RBP11.74□□□□□ -0.53
HERC6-202ENST00000273960 TIMP1P01033 207 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 IFNA4P05014 189 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 OR4E1P0C645 316 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 LAMP2P13473 410 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 ZNF3P17036 446 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 CD34P28906 385 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 CD80P33681 288 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 POU4F2Q12837 409 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 TMEM44Q2T9K0 475 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 OR2B11Q5JQS5 317 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 OR10K2Q6IF99 312 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 ABHD13Q7L211 337 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 OR4S1Q8NGB4 309 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 ELP5Q8TE02 316 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 BPIFA2Q96DR5 249 aa11.74□□□□□ -0.53
HERC6-202ENST00000273960 SMIM19Q96E16 107 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms