RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 FOLR1P15328 257 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ZNF74Q16587 644 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 PLA1AQ53H76 456 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 OR14A16Q8NHC5 309 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 SLC2A12Q8TD20 617 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 TSEN15Q8WW01 171 aaKnown RBP15.11■□□□□ 0.01
VPS54-201ENST00000272322 NKD1Q969G9 470 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 OR51J1Q9H342 316 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 C8orf33Q9H7E9 229 aaPredicted RBP15.11■□□□□ 0.01
VPS54-201ENST00000272322 EIF3KQ9UBQ5 218 aaKnown RBP15.11■□□□□ 0.01
VPS54-201ENST00000272322 CTSFQ9UBX1 484 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 SLC25A12O75746 678 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 HLA-DMAP28067 261 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 CCKBRP32239 447 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 BDH1Q02338 343 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ZNF117Q03924 483 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ZNF141Q15928 474 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ST3GAL2Q16842 350 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 YIF1BQ5BJH7 314 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ARHGAP40Q5TG30 622 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 BICRALQ6AI39 1079 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 OR7E24Q6IFN5 339 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 GLB1L2Q8IW92 636 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 OR2T4Q8NH00 348 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 MMP25Q9NPA2 562 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 FRRS1LQ9P0K9 344 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 MRM2Q9UI43 246 aaKnown RBP15.11■□□□□ 0.01
VPS54-201ENST00000272322 PHF3Q92576 2039 aaKnown RBP15.11■□□□□ 0.01
VPS54-201ENST00000272322 ATG2AQ2TAZ0 1938 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ZNF879B4DU55 563 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 SLC16A7O60669 478 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 OR6A2O95222 327 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 CD14P08571 375 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 IL11P20809 199 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ACTA2P62736 377 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 ACTG2P63267 376 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 LAMTOR1Q6IAA8 161 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 RPL22L1Q6P5R6 122 aaKnown RBP15.11■□□□□ 0.01
VPS54-201ENST00000272322 OR8H3Q8N146 312 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 OR5AK2Q8NH90 309 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 METTL21AQ8WXB1 218 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 SERTAD3Q9UJW9 196 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 FBXL21Q9UKT6 434 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 PI4KAP42356 2102 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 ANXA2P2A6NMY6 339 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 NPIPB9F8W1W9 429 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 H3BML4 177 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 SOX1O00570 391 aaPredicted RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 ARPC1BO15143 372 aaKnown RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 ZNF780AO75290 641 aaPredicted RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 ANXA2P07355 339 aaKnown RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 H2AFB2P0C5Z0 115 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 CFL1P23528 166 aaKnown RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 ERP29P30040 261 aaKnown RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 SLC37A1P57057 533 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 PLCXD2Q0VAA5 305 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 CCDC58Q4VC31 144 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 MESTQ5EB52 335 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 TMEM69Q5SWH9 247 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 LINC01590Q5TEZ4 76 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 WBP2NLQ6ICG8 309 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 PLPP7Q8NBV4 271 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 DVL3Q92997 716 aaPredicted RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 MICU1Q9BPX6 476 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 DPCDQ9BVM2 203 aaPredicted RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 DUSP15Q9H1R2 295 aaPredicted RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 IGHV1OR15-9A0A0B4J2B8 117 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 CSN2P05814 226 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 UCHL1P09936 223 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 STOMP27105 288 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 SKP1P63208 163 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 KLHL26Q53HC5 615 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 EXOSC6Q5RKV6 272 aaKnown RBP15.1■□□□□ 0.01
VPS54-201ENST00000272322 MANEAQ5SRI9 462 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 OR51D1Q8NGF3 324 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 TSPAN32Q96QS1 320 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 NUDT22Q9BRQ3 303 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 INPP5EQ9NRR6 644 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 ZNF281Q9Y2X9 895 aa15.1■□□□□ 0.01
VPS54-201ENST00000272322 EFCAB7A8K855 629 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 SEC14L5O43304 696 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 SERPINA3P01011 423 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 HRGP04196 525 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 HLA-DOBP13765 273 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 APEHP13798 732 aaKnown RBP15.09■□□□□ 0.01
VPS54-201ENST00000272322 ANXA7P20073 488 aaKnown RBP15.09■□□□□ 0.01
VPS54-201ENST00000272322 POU3F3P20264 500 aaPredicted RBP15.09■□□□□ 0.01
VPS54-201ENST00000272322 UQCRC1P31930 480 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 ZNF81P51508 661 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 GUCA2AQ02747 115 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 OR10K2Q6IF99 312 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 TPRA1Q86W33 373 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 SLCO1C1Q9NYB5 712 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 STMN3Q9NZ72 180 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 RNF215Q9Y6U7 377 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 LOC100509620A0A075B734 347 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 IFITM5A6NNB3 132 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 SC5DO75845 299 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 GLCEO94923 617 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 KDM4BO94953 1096 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms