RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TSPYL5Q86VY4 417 aaPredicted RBP14.02□□□□□ -0.17
USE1-201ENST00000263897 SNX32Q86XE0 403 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 ZNF837Q96EG3 531 aaPredicted RBP14.02□□□□□ -0.17
USE1-201ENST00000263897 TXNDC15Q96J42 360 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 LRR1Q96L50 414 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 ADAD1Q96M93 576 aaKnown RBP14.02□□□□□ -0.17
USE1-201ENST00000263897 HS6ST2Q96MM7 605 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 ZNF583Q96ND8 569 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 SLC38A2Q96QD8 506 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 PCDHAC1Q9H158 963 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 CRLF2Q9HC73 371 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 CRNNQ9UBG3 495 aaPredicted RBP14.02□□□□□ -0.17
USE1-201ENST00000263897 MOKQ9UQ07 419 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 ABCA1O95477 2261 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 ARFGEF3Q5TH69 2177 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 SLC35F4A4IF30 521 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 ATP6V1G2-DDX39BF2Z307 99 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 TUBA1BP68363 451 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 TUBA4AP68366 448 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 POU3F1Q03052 451 aaPredicted RBP14.01□□□□□ -0.17
USE1-201ENST00000263897 PUDPQ08623 228 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 C3orf36Q3SXR2 165 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 PHYHD1Q5SRE7 291 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 ERICH5Q6P6B1 374 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 TTC33Q6PID6 262 aaPredicted RBP14.01□□□□□ -0.17
USE1-201ENST00000263897 TUBA1AQ71U36 451 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 C20orf196Q8IYI0 205 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 FAM169BQ8N8A8 192 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 PCYOX1LQ8NBM8 494 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 OR5J2Q8NH18 312 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 C10orf82Q8WW14 230 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 MPP4Q96JB8 637 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 EMC6Q9BV81 110 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 CACNG6Q9BXT2 260 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 MOV10Q9HCE1 1003 aaKnown RBP14.01□□□□□ -0.17
USE1-201ENST00000263897 GID8Q9NWU2 228 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 SLC7A7Q9UM01 511 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 USP22Q9UPT9 525 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 JMJD1CQ15652 2540 aa14.01□□□□□ -0.17
USE1-201ENST00000263897 ZNF726A6NNF4 738 aa14□□□□□ -0.17
USE1-201ENST00000263897 RNF223E7ERA6 249 aa14□□□□□ -0.17
USE1-201ENST00000263897 M0R3G1 203 aa14□□□□□ -0.17
USE1-201ENST00000263897 SLC22A2O15244 555 aa14□□□□□ -0.17
USE1-201ENST00000263897 CRYAAP02489 173 aa14□□□□□ -0.17
USE1-201ENST00000263897 ADORA3P0DMS8 318 aa14□□□□□ -0.17
USE1-201ENST00000263897 CBR1P16152 277 aa14□□□□□ -0.17
USE1-201ENST00000263897 AHCYP23526 432 aa14□□□□□ -0.17
USE1-201ENST00000263897 MDH1P40925 334 aaKnown RBP14□□□□□ -0.17
USE1-201ENST00000263897 CHRNB3Q05901 458 aa14□□□□□ -0.17
USE1-201ENST00000263897 RAB35Q15286 201 aa14□□□□□ -0.17
USE1-201ENST00000263897 CARD17Q5XLA6 110 aa14□□□□□ -0.17
USE1-201ENST00000263897 CCDC36Q8IYA8 594 aa14□□□□□ -0.17
USE1-201ENST00000263897 PROX1Q92786 737 aa14□□□□□ -0.17
USE1-201ENST00000263897 ZNF426Q9BUY5 554 aa14□□□□□ -0.17
USE1-201ENST00000263897 KATNB1Q9BVA0 655 aa14□□□□□ -0.17
USE1-201ENST00000263897 REG4Q9BYZ8 158 aa14□□□□□ -0.17
USE1-201ENST00000263897 MED4Q9NPJ6 270 aa14□□□□□ -0.17
USE1-201ENST00000263897 MED29Q9NX70 200 aa14□□□□□ -0.17
USE1-201ENST00000263897 BAG5Q9UL15 447 aa14□□□□□ -0.17
USE1-201ENST00000263897 SH3GLB1Q9Y371 365 aa14□□□□□ -0.17
USE1-201ENST00000263897 CAPN7Q9Y6W3 813 aa14□□□□□ -0.17
USE1-201ENST00000263897 ZNF99A8MXY4 864 aaPredicted RBP13.99□□□□□ -0.17
USE1-201ENST00000263897 SSX4O60224 188 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 OR6A2O95222 327 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 CH25HO95992 272 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 IFNA14P01570 189 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 IGKV3-15P01624 115 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 IGLV1-44P01699 117 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 BMP4P12644 408 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 ZP4Q12836 540 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 CAMK2DQ13557 499 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 ZNF74Q16587 644 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 MST1LQ2TV78 715 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 CARM1Q86X55 608 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 WDFY1Q8IWB7 410 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 KCNS3Q9BQ31 491 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 PRSS27Q9BQR3 290 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 SLC19A3Q9BZV2 496 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 NANSQ9NR45 359 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 TAS2R5Q9NYW4 299 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 PMF1-BGLAPU3KQ54 211 aa13.99□□□□□ -0.17
USE1-201ENST00000263897 SONP18583 2426 aaKnown RBP13.98□□□□□ -0.17
USE1-201ENST00000263897 C11orf98E9PRG8 122 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 H7C417 338 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 CECR9P0C854 216 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 NAAAQ02083 359 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 SWI5Q1ZZU3 235 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 LRRC17Q8N6Y2 441 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 RP9Q8TA86 221 aaKnown RBP13.98□□□□□ -0.17
USE1-201ENST00000263897 B3GAT2Q9NPZ5 323 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 ARMCX1Q9P291 453 aa13.98□□□□□ -0.17
USE1-201ENST00000263897 CR1P17927 2039 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 SERPINI2O75830 405 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 HIST1H2ABP04908 130 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 IFNGR1P15260 489 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 TNFRSF1BP20333 461 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 KDELR2P33947 212 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 ARR3P36575 388 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 NUDT6P53370 316 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 BIDP55957 195 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms