RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TRAV1-2A0A0B4J238 106 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 LOC105371267A0A1B0GV96 52 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 A0A1W2PPL8 197 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 TCRBV16S1A1N1A0A5B0 115 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 NKX2-2O95096 273 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 IFNA7P01567 189 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 PRKACBP22694 351 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 DPP4P27487 766 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 PTH2RP49190 550 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 ARFIP1P53367 373 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 LGALS3BPQ08380 585 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 GRM7Q14831 915 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 OPCMLQ14982 345 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 AANATQ16613 207 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 CDONQ4KMG0 1287 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 GPR139Q6DWJ6 353 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 C11orf88Q6PI97 169 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 STAC2Q6ZMT1 411 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 ZNF782Q6ZMW2 699 aaPredicted RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 NDUFAF7Q7L592 441 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 GALNT11Q8NCW6 608 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 OR14A16Q8NHC5 309 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 TMEM106AQ96A25 262 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 KTI12Q96EK9 354 aaPredicted RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 MMABQ96EY8 250 aaPredicted RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 MRGPRX1Q96LB2 322 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 STACQ99469 402 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 CHST6Q9GZX3 395 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 SYT4Q9H2B2 425 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 PRO3102Q9H379 93 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 PNO1Q9NRX1 252 aaKnown RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 FANCMQ8IYD8 2048 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 RPS10-NUDT3A0A1W2PQS6 291 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 C2orf74A8MZ97 194 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 L7N2F9 121 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 S1PR1P21453 382 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 MAZP56270 477 aaKnown RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 CBFBQ13951 182 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 SMAD2Q15796 467 aaKnown RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 PWWP2BQ6NUJ5 590 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 TMEM65Q6PI78 240 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 LRRN1Q6UXK5 716 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 TMEM92Q6UXU6 159 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 MDGA2Q7Z553 956 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 BCORP1Q8N888 145 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 PLPP7Q8NBV4 271 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 OR5AK2Q8NH90 309 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 ZNF563Q8TA94 476 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 NKD1Q969G9 470 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 OR8D2Q9GZM6 311 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 MRM2Q9UI43 246 aaKnown RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 FOXJ3Q9UPW0 622 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 SATB2Q9UPW6 733 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 EPOPA6NHQ4 379 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 AIPO00170 330 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 CT45A8P0DMV1 189 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 CT45A9P0DMV2 189 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 GAAP10253 952 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 GRK6P43250 576 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 TAS2R20P59543 309 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 BTN1A1Q13410 526 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 MEP1BQ16820 701 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 CT45A2Q5DJT8 189 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 B3GNTL1Q67FW5 361 aaPredicted RBP8.31□□□□□ -1.08
MSH4-201ENST00000263187 MED25Q71SY5 747 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 FGD2Q7Z6J4 655 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 TMED4Q7Z7H5 227 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 SLITRK4Q8IW52 837 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 FAM160A2Q8N612 972 aaPredicted RBP8.31□□□□□ -1.08
MSH4-201ENST00000263187 RLN3Q8WXF3 142 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 NSMAFQ92636 917 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 C3orf49Q96BT1 292 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 ADOQ96SZ5 270 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 DHRS9Q9BPW9 319 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 Q9N2J8 555 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 LAMP5Q9UJQ1 280 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 SLC22A13Q9Y226 551 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 ATG2AQ2TAZ0 1938 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 TRAV18A0A075B6X5 111 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 A0A087WV62 115 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 GOSR2O14653 212 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 CTNSO60931 367 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 AKR7A3O95154 331 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 CCKBRP32239 447 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 TPMTP51580 245 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 ART1P52961 327 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 DLX2Q07687 328 aaPredicted RBP8.31□□□□□ -1.08
MSH4-201ENST00000263187 POU4F2Q12837 409 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 COL28A1Q2UY09 1125 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 ALG10Q5BKT4 473 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 DCAF12L2Q5VW00 463 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 OR10K2Q6IF99 312 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 ARMC6Q6NXE6 501 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 FAM220AQ7Z4H9 259 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 OOSP2Q86WS3 158 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 PM20D2Q8IYS1 436 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 OR6V1Q8N148 313 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 SLC22A18ASQ8N1D0 253 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 ANGPTL6Q8NI99 470 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms