RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 RPL7L1Q6DKI1 246 aaKnown RBP13.77□□□□□ -0.2
CCDC6-201ENST00000263102 MOB3BQ86TA1 216 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 ARFGAP1Q8N6T3 406 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 LGALS12Q96DT0 336 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 TMEM208Q9BTX3 173 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.77□□□□□ -0.2
CCDC6-201ENST00000263102 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 SAGE1Q9NXZ1 904 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 PPP1R3CQ9UQK1 317 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 IGHV3-15A0A0B4J1V0 119 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 OR5G3P0C626 314 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 CCR7P32248 378 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 TM4SF4P48230 202 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 HNRNPFP52597 415 aaKnown RBP13.77□□□□□ -0.2
CCDC6-201ENST00000263102 YIF1BQ5BJH7 314 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 CNIH2Q6PI25 160 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 FAM71CQ8NEG0 241 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 ELMOD3Q96FG2 381 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 AMBRA1Q9C0C7 1298 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 PATZ1Q9HBE1 687 aaKnown RBP13.77□□□□□ -0.2
CCDC6-201ENST00000263102 IGSF5Q9NSI5 407 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 MKS1Q9NXB0 559 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 DNAJC15Q9Y5T4 150 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 SLIT3O75094 1523 aa13.77□□□□□ -0.2
CCDC6-201ENST00000263102 J3KTA2 159 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 GPR171O14626 319 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 MUL1Q969V5 352 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 MRPS24Q96EL2 167 aaKnown RBP13.77□□□□□ -0.21
CCDC6-201ENST00000263102 ARV1Q9H2C2 271 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 GPR173Q9NS66 373 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 TRAV36DV7A0A075B6V5 113 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 C5orf49A4QMS7 147 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 PPIHO43447 177 aaKnown RBP13.77□□□□□ -0.21
CCDC6-201ENST00000263102 ANGPTL7O43827 346 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 CSO75390 466 aaKnown RBP13.77□□□□□ -0.21
CCDC6-201ENST00000263102 TPT1P13693 172 aaKnown RBP13.77□□□□□ -0.21
CCDC6-201ENST00000263102 PRLHRP49683 370 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 RIPPLY1Q0D2K3 151 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 PHLDA2Q53GA4 152 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 PRAMEF5Q5TYX0 476 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 PRAMEF6Q5VXH4 476 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 ZNF480Q8WV37 535 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 ISG20Q96AZ6 181 aaKnown RBP13.77□□□□□ -0.21
CCDC6-201ENST00000263102 ABHD6Q9BV23 337 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 NUDT9Q9BW91 350 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 ARPC3O15145 178 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 SORBS2O94875 1100 aaKnown RBP13.77□□□□□ -0.21
CCDC6-201ENST00000263102 PMP2P02689 132 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 ABHD11Q8NFV4 315 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 NIPAL2Q9H841 368 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 HRH3Q9Y5N1 445 aa13.77□□□□□ -0.21
CCDC6-201ENST00000263102 NFYAP23511 347 aaPredicted RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 HOXD9P28356 352 aaPredicted RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 MFGE8Q08431 387 aaPredicted RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 ZNF789Q5FWF6 425 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 SPNS3Q6ZMD2 512 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 CYP4V2Q6ZWL3 525 aaPredicted RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 BPIFB2Q8N4F0 458 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 NANPQ8TBE9 248 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 GGHQ92820 318 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 MEIOCA2RUB1 952 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 EIF1P41567 113 aaKnown RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 RPL35P42766 123 aaKnown RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 OR5I1Q13606 314 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 CRMP1Q14194 572 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 Q6ZTK2 550 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 C1orf87Q8N0U7 546 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 OR56B1Q8NGI3 324 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 PDLIM7Q9NR12 457 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 TMEM221A6NGB7 291 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 PCGF2P35227 344 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 C18orf63Q68DL7 685 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 ANKRD34AQ69YU3 496 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 THNSL2Q86YJ6 484 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 WDTC1Q8N5D0 677 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 GALNT9Q9HCQ5 603 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 OR6C65A6NJZ3 312 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 FZD7O75084 574 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 SMIM17P0DL12 118 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 CT45A10P0DMU9 189 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 SMAD4Q13485 552 aaKnown RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 RTL8BQ17RB0 113 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 MARCH8Q5T0T0 291 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 METAP1DQ6UB28 335 aaPredicted RBP13.76□□□□□ -0.21
CCDC6-201ENST00000263102 LINC01599Q8WXQ3 324 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 NID2Q14112 1375 aa13.76□□□□□ -0.21
CCDC6-201ENST00000263102 SPRY3O43610 288 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 AADACP22760 399 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 KDM8Q8N371 416 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 OR1E3Q8WZA6 343 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 CNTNAP3Q9BZ76 1288 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 MMP28Q9H239 520 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 C1GALT1Q9NS00 363 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 TNFSF11O14788 317 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 ARHGEF15O94989 841 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 RAP2BP61225 183 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 CMTM4Q8IZR5 234 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 CCDC74BQ96LY2 380 aa13.75□□□□□ -0.21
CCDC6-201ENST00000263102 UBTD1Q9HAC8 227 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms