RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 EDNRAP25101 427 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 CLDN17P56750 224 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 CDSNQ15517 529 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 TAF11Q15544 211 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 RFX4Q33E94 735 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 ANKRD34AQ69YU3 496 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 FAHD1Q6P587 224 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 SMARCD3Q6STE5 483 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 THSD4Q6ZMP0 1018 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 ZNF620Q6ZNG0 422 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 SLC35D2Q76EJ3 337 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 STK32CQ86UX6 486 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 CA5BP1Q8WTZ4 195 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 GABARAPL1Q9H0R8 117 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 OR52D1Q9H346 318 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 IL20Q9NYY1 176 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 JKAMPQ9P055 326 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 PROCRQ9UNN8 238 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 RCE1Q9Y256 329 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 ALPK2Q86TB3 2170 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 TENM4Q6N022 2769 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 A0A1W2PRG6 482 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 NPIPB13A6NJU9 1138 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 NPIPB4C9JG80 1138 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 MCIDASD6RGH6 385 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 MSTNO14793 375 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 OR3A2P47893 321 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 SELENOPP49908 381 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 DAPP51397 102 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 CTXN1P60606 82 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 RCN1Q15293 331 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 SLC25A35Q3KQZ1 300 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 CASP12Q6UXS9 341 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 TFAP2EQ6VUC0 442 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 AAED1Q7RTV5 226 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 IGFN1Q86VF2 1251 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 KIF18BQ86Y91 864 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 ATG16L2Q8NAA4 619 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 FANK1Q8TC84 345 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 GPX7Q96SL4 187 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 EMC6Q9BV81 110 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 UCK2Q9BZX2 261 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 DCLRE1BQ9H816 532 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 ZNF556Q9HAH1 456 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 REV1Q9UBZ9 1251 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 IL20RAQ9UHF4 553 aa14.73□□□□□ -0.05
CHCHD3-201ENST00000262570 FASNP49327 2511 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 DOPEY1Q5JWR5 2465 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 SLC35F4A4IF30 521 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 SAC3D1A6NKF1 404 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 A8MXE2 369 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 H0YHG0 523 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 PDLIM1O00151 329 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 SMNDC1O75940 238 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 BCL10O95999 233 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 TP53P04637 393 aaPredicted RBP14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 CD14P08571 375 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 RNF224P0DH78 156 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 ANPEPP15144 967 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 RPL4P36578 427 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 ACKR1Q16570 336 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 RPL13AP3Q6NVV1 102 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 NIPAL3Q6P499 406 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 KLHL17Q6TDP4 642 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 WDFY1Q8IWB7 410 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 ZNF100Q8IYN0 542 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 CLDN22Q8N7P3 220 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 ZNF610Q8N9Z0 462 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 APH1AQ96BI3 265 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 KATNB1Q9BVA0 655 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 OPN3Q9H1Y3 402 aaPredicted RBP14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 TXNIPQ9H3M7 391 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 EGLN3Q9H6Z9 239 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 NRIP3Q9NQ35 241 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 CDH10Q9Y6N8 788 aa14.72□□□□□ -0.05
CHCHD3-201ENST00000262570 AKAP8O43823 692 aaKnown RBP14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 CLDN14O95500 239 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 IGHMP01871 453 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 BIDP55957 195 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 PPP2R2BQ00005 443 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 MELKQ14680 651 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 KDM4DQ6B0I6 523 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 ZNF474Q6S9Z5 364 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 DPY19L2P2Q6ZN68 376 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 FAM122BQ7Z309 247 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 LUZP2Q86TE4 346 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 TMEM123Q8N131 208 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 OR6X1Q8NH79 312 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 SSC4DQ8WTU2 575 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 DNAJC9Q8WXX5 260 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 SAMD8Q96LT4 415 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 ADAD1Q96M93 576 aaKnown RBP14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 OR2M2Q96R28 347 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 CIB1Q99828 191 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 OSBPL10Q9BXB5 764 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 PLA2G12AQ9BZM1 189 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 NDEL1Q9GZM8 345 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 SMURF2Q9HAU4 748 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 KIF17Q9P2E2 1029 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms