RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LINGO2Q7L985 606 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 MDP1Q86V88 176 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 FAM169BQ8N8A8 192 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 SLC26A7Q8TE54 656 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 HIST1H2ACQ93077 130 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 MSI2Q96DH6 328 aaKnown RBP10.63□□□□□ -0.71
TRAF4-202ENST00000262396 BOD1Q96IK1 185 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 EMC6Q9BV81 110 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 PTDSS2Q9BVG9 487 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 ZNF442Q9H7R0 627 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 TMBIM4Q9HC24 238 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 CRNNQ9UBG3 495 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-202ENST00000262396 SEC14L4Q9UDX3 406 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 ATRQ13535 2644 aa10.63□□□□□ -0.71
TRAF4-202ENST00000262396 A0A087WUJ7 227 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 IGHV2OR16-5A0A0B4J2B6 119 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 IGHV4-61A0A0C4DH41 118 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 FTCDNL1E5RQL4 147 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 RPL36A-HNRNPH2H7BZ11 118 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 ZNF432O94892 652 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 TGDSO95455 350 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 STAMBPO95630 424 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 HLA-HP01893 362 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 CELA3BP08861 270 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 ADRA2AP08913 450 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 ARAFP10398 606 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 IGFBP5P24593 272 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 PTDSS1P48651 473 aaKnown RBP10.62□□□□□ -0.71
TRAF4-202ENST00000262396 CSNK1A1P48729 337 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 SELENOVP59797 346 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 RPS23P62266 143 aaKnown RBP10.62□□□□□ -0.71
TRAF4-202ENST00000262396 EGR4Q05215 589 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 CAMK2DQ13557 499 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 OR1Q1Q15612 314 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 DHRS4L2Q6PKH6 230 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 UGT2A3Q6UWM9 527 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 MAVSQ7Z434 540 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 LSMEM1Q8N8F7 131 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 HIPK4Q8NE63 616 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 UBASH3BQ8TF42 649 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 OR2M2Q96R28 347 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 PRR14Q9BWN1 585 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 TPK1Q9H3S4 243 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 RABEP2Q9H5N1 569 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 EVA1AQ9H8M9 152 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 RNF121Q9H920 327 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 SEC61A2Q9H9S3 476 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 COL6A5A8TX70 2615 aa10.62□□□□□ -0.71
TRAF4-202ENST00000262396 PLCE1Q9P212 2302 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 A0A1W2PPW3 197 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 LRP5LA4QPB2 252 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 VWC2LB2RUY7 222 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 C11orf98E9PRG8 122 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 IGKV3-15P01624 115 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 IGLV1-44P01699 117 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 ADORA3P0DMS8 318 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 UMPSP11172 480 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 PCMT1P22061 227 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 HTR2AP28223 471 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 IDH3AP50213 366 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 AQP5P55064 265 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 PUDPQ08623 228 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 CR1LQ2VPA4 569 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 REP15Q6BDI9 236 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 C6orf89Q6UWU4 347 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 C20orf196Q8IYI0 205 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 SCAIQ8N9R8 606 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 ADPRHL1Q8NDY3 354 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 C7orf26Q96N11 449 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 SNX18Q96RF0 628 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 CCDC28BQ9BUN5 200 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 NOX3Q9HBY0 568 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 MED29Q9NX70 200 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 KLHL14Q9P2G3 628 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 REV1Q9UBZ9 1251 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 DUSP13Q9UII6 198 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 FBXL3Q9UKT7 428 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 CHST2Q9Y4C5 530 aa10.61□□□□□ -0.71
TRAF4-202ENST00000262396 M0R233 179 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 ANGPT2O15123 496 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 RNF13O43567 381 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 ZNF500O60304 480 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-202ENST00000262396 UBL3O95164 117 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 FARS2O95363 451 aaKnown RBP10.6□□□□□ -0.71
TRAF4-202ENST00000262396 C8BP07358 591 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 BMP2P12643 396 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 B4GALT1P15291 398 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 TCN1P20061 433 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-202ENST00000262396 RAB1AP62820 205 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 HGFACQ04756 655 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 CCNIQ14094 377 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 GLIPR1L2Q4G1C9 344 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 LRIF1Q5T3J3 769 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 TTC33Q6PID6 262 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-202ENST00000262396 BLOC1S3Q6QNY0 202 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 CDK20Q8IZL9 346 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
TRAF4-202ENST00000262396 LINC01356Q8N9X3 169 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms