RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ARPC2O15144 300 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 GALR3O60755 368 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 WDR1O75083 606 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SH3BGRLO75368 114 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 GCGP01275 180 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PNMTP11086 282 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 F3P13726 295 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ATP5IP56385 69 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 EIF5AP63241 154 aaKnown RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 FAM3AP98173 230 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PGM5Q15124 567 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SNRNP35Q16560 246 aaKnown RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SPIN4Q56A73 249 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF628Q5EBL2 1059 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ELFN2Q5R3F8 820 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 C1orf194Q5T5A4 169 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM198Q66K66 360 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 LAIR1Q6GTX8 287 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TEX38Q6PEX7 206 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 MTSS1LQ765P7 747 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 LRRC70Q7Z2Q7 622 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 H1FOOQ8IZA3 346 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 FAM24BQ8N5W8 94 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ARL14EPQ8N8R7 260 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 DBF4BQ8NFT6 615 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 OR4E2Q8NGC2 313 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 KTI12Q96EK9 354 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 GALNT14Q96FL9 552 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 HHIPL1Q96JK4 782 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 RNF157Q96PX1 679 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 HIST1H2BLQ99880 126 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CHIAQ9BZP6 476 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SPRTNQ9H040 489 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF552Q9H707 407 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ANKRA2Q9H9E1 313 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ADGRL4Q9HBW9 690 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 DMRT3Q9NQL9 472 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 G6PC2Q9NQR9 355 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 IL17CQ9P0M4 197 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 LAMB1P07942 1786 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 RLFQ13129 1914 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 A0A087WZ62 844 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 KIR2DL5BA0A0G2JN68 375 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 KIR2DL5BA0A0G2JPC4 375 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 HMSDA8MTL9 139 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 HEPACAM2A8MVW5 462 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 M0QXV9 152 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CASKO14936 926 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TLX2O43763 284 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SC5DO75845 299 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ACTL6AO96019 429 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 VTNP04004 478 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CEACAM5P06731 702 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 UBBP0CG47 229 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 EPORP19235 508 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 UBA52P62987 128 aaKnown RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 NKX6-1P78426 367 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 AESQ08117 197 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ST3GAL2Q16842 350 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 OR10K2Q6IF99 312 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TRMT10BQ6PF06 316 aaKnown RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 DHRS11Q6UWP2 260 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 COMMD2Q86X83 199 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 C1orf210Q8IVY1 113 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ZC3H3Q8IXZ2 948 aaKnown RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 KIR2DL5AQ8N109 375 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ZBTB2Q8N680 514 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TTC9BQ8N6N2 239 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SLC35G3Q8N808 338 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 C1orf162Q8NEQ5 155 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 OR51D1Q8NGF3 324 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PIGXQ8TBF5 258 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ARNTL2Q8WYA1 636 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 MSLNLQ96KJ4 702 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 WDCPQ9H6R7 721 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SEC61A2Q9H9S3 476 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 EML4Q9HC35 981 aaKnown RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 B3GAT2Q9NPZ5 323 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 C1GALT1Q9NS00 363 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 MRM2Q9UI43 246 aaKnown RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PADI3Q9ULW8 664 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TNS3Q68CZ2 1445 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 TCRBV9S1A1TA0A576 114 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 B4GALT5O43286 388 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 PRSS23O95084 383 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 C8AP07357 584 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 OR8U9P0C7N5 309 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 DRD2P14416 443 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 TYRP14679 529 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 S100GP29377 79 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF140P52738 457 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SSBP2P81877 361 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF763Q0D2J5 394 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 PCLAFQ15004 111 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 C1orf53Q5VUE5 145 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SLC22A10Q63ZE4 541 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 FIGLAQ6QHK4 219 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms