RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TMEM123Q8N131 208 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 LRRC17Q8N6Y2 441 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 FAM156AQ8NDB6 213 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 OR1K1Q8NGR3 316 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 PFN4Q8NHR9 129 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 FOXC2Q99958 501 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 UBTD1Q9HAC8 227 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 B3GAT2Q9NPZ5 323 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 FAM32AQ9Y421 112 aaKnown RBP21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 SNX13Q9Y5W8 968 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 ENPP4Q9Y6X5 453 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 CSMD2Q7Z408 3487 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 SLC35F4A4IF30 521 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 J3KTA2 159 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 RNF13O43567 381 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 ROR2Q01974 943 aaKnown RBP21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 WDR31Q8NA23 367 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 MAGEE2Q8TD90 523 aaPredicted RBP21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 RADILQ96JH8 1075 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 NSMCE2Q96MF7 247 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 MED29Q9NX70 200 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 MGAT4BQ9UQ53 548 aa21.36■■□□□ 1.01
SDF2L1-201ENST00000248958 ITGA2P17301 1181 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 PTAFRP25105 342 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 ART1P52961 327 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 LGALS3BPQ08380 585 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 ANKRD16Q6P6B7 361 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 TMEM108Q6UXF1 575 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 SLC35D2Q76EJ3 337 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 C20orf196Q8IYI0 205 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 ACOT11Q8WXI4 607 aaPredicted RBP21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 PIGTQ969N2 578 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 TXNDC15Q96J42 360 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 ALPK1Q96QP1 1244 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 EMC6Q9BV81 110 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 GPR35Q9HC97 309 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 MOV10Q9HCE1 1003 aaKnown RBP21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 C20orf141Q9NUB4 165 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 PRR14LQ5THK1 2151 aa21.35■■□□□ 1.01
SDF2L1-201ENST00000248958 SPG11Q96JI7 2443 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 DPRXA6NFQ7 191 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 BLOC1S5-TXNDC5H3BN57 136 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 FFAR1O14842 300 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 PRSS23O95084 383 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 IFNGR1P15260 489 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 RHCEP18577 417 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 CDH2P19022 906 aaPredicted RBP21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 CD53P19397 219 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 BSPH1Q075Z2 132 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 TESK1Q15569 626 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 TBRG1Q3YBR2 411 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 LINGO2Q7L985 606 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 CDK20Q8IZL9 346 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 RBM15BQ8NDT2 890 aaKnown RBP21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 OR6X1Q8NH79 312 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 BPIFA2Q96DR5 249 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 PYURFQ96I23 114 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 PIP5K1AQ99755 562 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 C1orf21Q9H246 121 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 MAN2C1Q9NTJ4 1040 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 BEX4Q9NWD9 120 aaPredicted RBP21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 NPAP1Q9NZP6 1156 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 RHCGQ9UBD6 479 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 TACC2O95359 2948 aa21.34■■□□□ 1.01
SDF2L1-201ENST00000248958 POLQO75417 2590 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 HS3ST1O14792 307 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 ARPC2O15144 300 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 TMCC2O75069 709 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 SERPINI2O75830 405 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 PLAUP00749 431 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 TSPAN19P0C672 248 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 IFI30P13284 250 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 BIDP55957 195 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 UBE2NP61088 152 aaKnown RBP21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 PRKCDQ05655 676 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 RPL18Q07020 188 aaKnown RBP21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 FOXD4Q12950 439 aaPredicted RBP21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 DEFB113Q30KQ7 82 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 ANKDD1AQ495B1 522 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 RRM2BQ7LG56 351 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 HDDC2Q7Z4H3 204 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 ZNF611Q8N823 705 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 OR6N1Q8NGY5 312 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 CXXC4Q9H2H0 198 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 MUC13Q9H3R2 512 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 CRLF2Q9HC73 371 aa21.33■■□□□ 1.01
SDF2L1-201ENST00000248958 HRNRQ86YZ3 2850 aaPredicted RBP21.33■■□□□ 1
SDF2L1-201ENST00000248958 ARPC4-TTLL3A0A0A6YYG9 625 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 A0A1W2PR80 420 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 A0A1W2PRG6 482 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 M0R3G1 203 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 CLOCKO15516 846 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 BCL10O95999 233 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 ZNF83P51522 516 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 CAMK2DQ13557 499 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 CEACAM16Q2WEN9 425 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 CARD17Q5XLA6 110 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 ZNF730Q6ZMV8 503 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 MBOAT2Q6ZWT7 520 aa21.32■■□□□ 1
SDF2L1-201ENST00000248958 TRPM8Q7Z2W7 1104 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms