RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 HENMT1Q5T8I9 393 aaKnown RBP12.37□□□□□ -0.43
NEK4-201ENST00000233027 NPSR1Q6W5P4 371 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 SLC16A14Q7RTX9 510 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 OR51D1Q8NGF3 324 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 OR56B1Q8NGI3 324 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 TCTN2Q96GX1 697 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 TMEM38AQ9H6F2 299 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 EMC7Q9NPA0 242 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 MARCH5Q9NX47 278 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 NTNG1Q9Y2I2 539 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 BLACEA4D250 179 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 TK1P04183 234 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 NPPBP16860 134 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 IKZF1Q13422 519 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 CLVS2Q5SYC1 327 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 FAM71E1Q6IPT2 247 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 PAQR6Q6TCH4 344 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 NANOGP1Q8N7R0 232 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 RBPMSQ93062 196 aaKnown RBP12.36□□□□□ -0.43
NEK4-201ENST00000233027 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
NEK4-201ENST00000233027 EVA1AQ9H8M9 152 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 SRPK3Q9UPE1 567 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 TMED7-TICAM2A0A0A6YYA0 188 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 TOR1AO14656 332 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 ADAM23O75077 832 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 CASP6P55212 293 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 KIAA1024LP59773 190 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
NEK4-201ENST00000233027 GPR78Q96P69 363 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 TMED7Q9Y3B3 224 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 TRDV1A0A1B0GX56 115 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 TRABD2BA6NFA1 517 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 SCGB1D1O95968 90 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 LBX1P52954 281 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 CLINT1Q14677 625 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 XKR7Q5GH72 579 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 Q6ZTK2 550 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 PDCD1LG2Q9BQ51 273 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 ICMTO60725 284 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 FPR3P25089 353 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 ISL1P61371 349 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 SEMA3BQ13214 749 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 ATP13A2Q9NQ11 1180 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 E9PI62 339 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 GPR137BO60478 399 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 ABOP16442 354 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 SLC19A1P41440 591 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 MEP1BQ16820 701 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 ZMAT1Q5H9K5 638 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 GLYATL3Q5SZD4 288 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 MARCH3Q86UD3 253 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 TMEM217Q8N7C4 229 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 MRPL38Q96DV4 380 aaKnown RBP12.36□□□□□ -0.43
NEK4-201ENST00000233027 ANKRD19PQ9H560 264 aa12.36□□□□□ -0.43
NEK4-201ENST00000233027 K7ESM1 405 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 PLPP1O14494 284 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 SLCO2B1O94956 709 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 SLC2A10O95528 541 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 HOXC13P31276 330 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 IL2RGP31785 369 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 ACTBL2Q562R1 376 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 SLC48A1Q6P1K1 146 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 DPY19L2P2Q6ZN68 376 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 DCLRE1CQ96SD1 692 aaKnown RBP12.35□□□□□ -0.43
NEK4-201ENST00000233027 FAM234AQ9H0X4 552 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 NIPAL2Q9H841 368 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 DHCR7Q9UBM7 475 aaKnown RBP12.35□□□□□ -0.43
NEK4-201ENST00000233027 NSG1A0A0A6YYJ2 146 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 ELK1P19419 428 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 ERVFC1P60507 584 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 ZNF684Q5T5D7 378 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 GAREM2Q75VX8 874 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 SYT9Q86SS6 491 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 SLC16A11Q8NCK7 471 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 SLC25A46Q96AG3 418 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
NEK4-201ENST00000233027 P2RY12Q9H244 342 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 CGGBP1Q9UFW8 167 aaPredicted RBP12.35□□□□□ -0.43
NEK4-201ENST00000233027 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 HCFC2Q9Y5Z7 792 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 F10P00742 488 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 GPX2P18283 190 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 CD38P28907 300 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 CSNK1G2P78368 415 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 GPR176Q14439 515 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 TMUB2Q71RG4 321 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 BATF2Q8N1L9 274 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 OR14A16Q8NHC5 309 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 LRRC46Q96FV0 321 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 SH3BGRL2Q9UJC5 107 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 ASB1Q9Y576 335 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 TRAV36DV7A0A075B6V5 113 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 RPA2P15927 270 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms