RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 NDUFAF7Q7L592 441 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 SLC16A13Q7RTY0 426 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 ZSCAN1Q8NBB4 408 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 ZCCHC10Q8TBK6 192 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 POTEKPQ9BYX7 375 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 PITHD1Q9GZP4 211 aaPredicted RBP13.03□□□□□ -0.32
SHPK-201ENST00000225519 MEPEQ9NQ76 525 aaPredicted RBP13.03□□□□□ -0.32
SHPK-201ENST00000225519 C2orf42Q9NWW7 574 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 LINC00587B1AMM8 73 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 BCL2L11O43521 198 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 OR4E1P0C645 316 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 SMCO1Q147U7 214 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 ZNF627Q7L945 461 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 PTDSS2Q9BVG9 487 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 WNT6Q9Y6F9 365 aa13.03□□□□□ -0.32
SHPK-201ENST00000225519 LRRC72A6NJI9 287 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 M0QYG6 137 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 CTNSO60931 367 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 NDUFB2O95178 105 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 SNAPINO95295 136 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 TACSTD2P09758 323 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 ARFIP1P53367 373 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 DUSP8Q13202 625 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 Q499Y3 187 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 FAM122BQ7Z309 247 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 OR1J4Q8NGS1 313 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 LINC00615Q96LM1 132 aaPredicted RBP13.02□□□□□ -0.32
SHPK-201ENST00000225519 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 WDR13Q9H1Z4 485 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 FBXO4Q9UKT5 387 aa13.02□□□□□ -0.32
SHPK-201ENST00000225519 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.02□□□□□ -0.32
SHPK-201ENST00000225519 SCAMP1O15126 338 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 OR2F2O95006 317 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 PMS2P2O95744 297 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 PRNPP04156 253 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 CRYBA1P05813 215 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 FABP1P07148 127 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 PRKXP51817 358 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 POLR2GP62487 172 aaKnown RBP eCLIP13.02□□□□□ -0.33
SHPK-201ENST00000225519 EEF1A1P68104 462 aaKnown RBP13.02□□□□□ -0.33
SHPK-201ENST00000225519 PLA2G7Q13093 441 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 OR2F1Q13607 317 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 FNDC3BQ53EP0 1204 aaKnown RBP13.02□□□□□ -0.33
SHPK-201ENST00000225519 DCST2Q5T1A1 773 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 ARL11Q969Q4 196 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 FBXO34Q9NWN3 711 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 ZNF337Q9Y3M9 751 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 A0A1W2PPV9 198 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 XRCC3O43542 346 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 ADAM11O75078 769 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.33
SHPK-201ENST00000225519 NANOS3P60323 173 aaKnown RBP13.02□□□□□ -0.33
SHPK-201ENST00000225519 RAB5BP61020 215 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 CAP1Q01518 475 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 TEAD2Q15562 447 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 TSC22D1Q15714 1073 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 CSRP2Q16527 193 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 ALG10BQ5I7T1 473 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 UQCC3Q6UW78 93 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 UNQ9370/PRO34162Q6UXP9 181 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 RNF44Q7L0R7 432 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 KCNRGQ8N5I3 272 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 TSEN15Q8WW01 171 aaKnown RBP13.02□□□□□ -0.33
SHPK-201ENST00000225519 TCEAL3Q969E4 200 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 NIT2Q9NQR4 276 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 ANKRD10Q9NXR5 420 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 MYEF2Q9P2K5 600 aaKnown RBP13.02□□□□□ -0.33
SHPK-201ENST00000225519 MKL2Q9ULH7 1088 aa13.02□□□□□ -0.33
SHPK-201ENST00000225519 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 TSPAN11A1L157 253 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 CCL16O15467 120 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 PRICKLE3O43900 615 aaPredicted RBP13.01□□□□□ -0.33
SHPK-201ENST00000225519 NID1P14543 1247 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 TCEA2Q15560 299 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 ARHGAP11BQ3KRB8 267 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 ZNF511Q8NB15 262 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 OR4K14Q8NGD5 310 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 ZNF558Q96NG5 402 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 LMAN2LQ9H0V9 348 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 GAREM1Q9H706 876 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 ZFP57Q9NU63 452 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 SPHK1Q9NYA1 384 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 KLF15Q9UIH9 416 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 KIF26AQ9ULI4 1882 aaPredicted RBP13.01□□□□□ -0.33
SHPK-201ENST00000225519 A0A087WV48 116 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 TMEM72A0PK05 275 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 GGT3PA6NGU5 568 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 ELOA3DA6NLF2 546 aaPredicted RBP13.01□□□□□ -0.33
SHPK-201ENST00000225519 IFNA4P05014 189 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 DIO1P49895 249 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 KCNAB1Q14722 419 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 ELOA3BQ3SY89 546 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 ELOA3Q8NG57 546 aa13.01□□□□□ -0.33
SHPK-201ENST00000225519 CASTOR1Q8WTX7 329 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms