RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 WNT2BQ93097 391 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 TSPAN32Q96QS1 320 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 DDOQ99489 341 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 IFT27Q9BW83 186 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 KLHL9Q9P2J3 617 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 KLHL13Q9P2N7 655 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF346Q9UL40 294 aaKnown RBP12.5□□□□□ -0.41
SEC61B-201ENST00000223641 LRRC42Q9Y546 428 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 FAM215AQ9Y5M1 114 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 IER3IP1Q9Y5U9 82 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 FLVCR1Q9Y5Y0 555 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 MED12LQ86YW9 2145 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 A0A1W2PRG6 482 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 MBD3L4A6NDZ8 208 aaPredicted RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 MBD3L3A6NE82 208 aaPredicted RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 MBD3L5A6NJ08 208 aaPredicted RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF724A8MTY0 619 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 PRRG2O14669 202 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 SURF4O15260 269 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 SLC19A2O60779 497 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 HMGN1P05114 100 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 FCGR2AP12318 317 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 IFNGR1P15260 489 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ABOP16442 354 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 NTF4P34130 210 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 RPL27P61353 136 aaKnown RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ERVK-25P63136 954 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 MYBPC1Q00872 1141 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 POU3F1Q03052 451 aaPredicted RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 RBPJQ06330 500 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 GUSBP1Q15486 140 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 C6orf52Q5T4I8 152 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF691Q5VV52 312 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 GTF2IRD2BQ6EKJ0 949 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF585AQ6P3V2 769 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 PLXDC2Q6UX71 529 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 GPAT4Q86UL3 456 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 GTF2IRD2Q86UP8 949 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 MBD3L2Q8NHZ7 208 aaPredicted RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 TRUB1Q8WWH5 349 aaKnown RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 CYGBQ8WWM9 190 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 TXNDC15Q96J42 360 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 Q96M85 177 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ERMAPQ96PL5 475 aaPredicted RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 SNX18Q96RF0 628 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 TRIB1Q96RU8 372 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 POLDIP3Q9BY77 421 aaKnown RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 ANKRD60Q9BZ19 345 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 TP63Q9H3D4 680 aaPredicted RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 CMC2Q9NRP2 79 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 GLRX2Q9NS18 164 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 GMPPBQ9Y5P6 360 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 DOCK7Q96N67 2140 aa12.49□□□□□ -0.41
SEC61B-201ENST00000223641 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
SEC61B-201ENST00000223641 GPR171O14626 319 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 DENRO43583 198 aaKnown RBP12.48□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF432O94892 652 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 PLGP00747 810 aaPredicted RBP12.48□□□□□ -0.41
SEC61B-201ENST00000223641 GNAO1P09471 354 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 HIST1H1CP16403 213 aaKnown RBP12.48□□□□□ -0.41
SEC61B-201ENST00000223641 ACVR2AP27037 513 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 TIMP3P35625 211 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 DAP3P51398 398 aaKnown RBP12.48□□□□□ -0.41
SEC61B-201ENST00000223641 ISL1P61371 349 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 C1orf185Q5T7R7 199 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 RPTNQ6XPR3 784 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 WDFY1Q8IWB7 410 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 OR6X1Q8NH79 312 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 TMEM45BQ96B21 275 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 ADAD1Q96M93 576 aaKnown RBP12.48□□□□□ -0.41
SEC61B-201ENST00000223641 MUS81Q96NY9 551 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
SEC61B-201ENST00000223641 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
SEC61B-201ENST00000223641 PRRG4Q9BZD6 226 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 MED29Q9NX70 200 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 GRHPRQ9UBQ7 328 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 HSPE1-MOB4S4R3N1 261 aa12.48□□□□□ -0.41
SEC61B-201ENST00000223641 TEX13CA0A0J9YWL9 993 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 SLC35F4A4IF30 521 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 CENPBD1B2RD01 187 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 SS18L1O75177 396 aaPredicted RBP12.47□□□□□ -0.41
SEC61B-201ENST00000223641 SLC2A10O95528 541 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 CLIC3O95833 236 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 BCL10O95999 233 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 YES1P07947 543 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 GABRB1P18505 474 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 MYF6P23409 242 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 PCYT1AP49585 367 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 CDC42P60953 191 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 C1DQ13901 141 aaKnown RBP12.47□□□□□ -0.41
SEC61B-201ENST00000223641 MESTQ5EB52 335 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 FAM205BPQ63HN1 556 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 CASP12Q6UXS9 341 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 PTCHD4Q6ZW05 846 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 ENTHD1Q8IYW4 607 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms