RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CYP2R1Q6VVX0 501 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 NANOGNBQ7Z5D8 188 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 PXKQ7Z7A4 578 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 CYP4Z1Q86W10 505 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 WDR31Q8NA23 367 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 MUCL1Q96DR8 90 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 CLPTM1LQ96KA5 538 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 C7orf34Q96L11 122 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 MUS81Q96NY9 551 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 C1QTNF6Q9BXI9 259 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 NMNAT1Q9HAN9 279 aaPredicted RBP11.14□□□□□ -0.63
LSM5-201ENST00000223084 TAS2R1Q9NYW7 299 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 PLEKHA6Q9Y2H5 1048 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 NOX1Q9Y5S8 564 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 HEATR1Q9H583 2144 aaKnown RBP11.14□□□□□ -0.63
LSM5-201ENST00000223084 A0A087WUU8 490 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 M0R3G1 203 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 SEMG1P04279 462 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 F13BP05160 661 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 MAKP20794 623 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 AQP2P41181 271 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 BIDP55957 195 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 MS4A2Q01362 244 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 ROR2Q01974 943 aaKnown RBP11.13□□□□□ -0.63
LSM5-201ENST00000223084 RPL18Q07020 188 aaKnown RBP11.13□□□□□ -0.63
LSM5-201ENST00000223084 ZP4Q12836 540 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 CAMK2DQ13557 499 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 MELKQ14680 651 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 SPATS1Q496A3 300 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 IQCCQ4KMZ1 466 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 HIKESHIQ53FT3 197 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 HMBOX1Q6NT76 420 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 ZNF730Q6ZMV8 503 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 SLC35D2Q76EJ3 337 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 NRMQ8IXM6 262 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 TMEM123Q8N131 208 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 GPR137CQ8N3F9 429 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 PIK3C3Q8NEB9 887 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 MOSPD2Q8NHP6 518 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 ZNF837Q96EG3 531 aaPredicted RBP11.13□□□□□ -0.63
LSM5-201ENST00000223084 LINC00470Q9BZP3 86 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 SLC17A5Q9NRA2 495 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 NPAP1Q9NZP6 1156 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 FAM32AQ9Y421 112 aaKnown RBP11.13□□□□□ -0.63
LSM5-201ENST00000223084 SLC25A15Q9Y619 301 aa11.13□□□□□ -0.63
LSM5-201ENST00000223084 CSMD2Q7Z408 3487 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 CSMD1Q96PZ7 3565 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 DPRXA6NFQ7 191 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 OR6C65A6NJZ3 312 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 ZNF726A6NNF4 738 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
LSM5-201ENST00000223084 H1F0P07305 194 aaKnown RBP11.12□□□□□ -0.63
LSM5-201ENST00000223084 RHCEP18577 417 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 OR7E24Q6IFN5 339 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 ABHD12BQ7Z5M8 362 aaPredicted RBP11.12□□□□□ -0.63
LSM5-201ENST00000223084 P2RY8Q86VZ1 359 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 C20orf196Q8IYI0 205 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 OR1K1Q8NGR3 316 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 OR52J3Q8NH60 311 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 LIPHQ8WWY8 451 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 ACOT11Q8WXI4 607 aaPredicted RBP11.12□□□□□ -0.63
LSM5-201ENST00000223084 BPIFA2Q96DR5 249 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 USB1Q9BQ65 265 aaKnown RBP11.12□□□□□ -0.63
LSM5-201ENST00000223084 THTPAQ9BU02 230 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 UBTD1Q9HAC8 227 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 GPR35Q9HC97 309 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 CCM2LQ9NUG4 571 aaPredicted RBP11.12□□□□□ -0.63
LSM5-201ENST00000223084 ACTR3BQ9P1U1 418 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 ST6GALNAC2Q9UJ37 374 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
LSM5-201ENST00000223084 DSCAMO60469 2012 aa11.12□□□□□ -0.63
LSM5-201ENST00000223084 PRRC2AP48634 2157 aaKnown RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 TRAV27A0A087WT01 109 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 A0A096LPE4 126 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TRBV4-1A0A0J9YWV2 114 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 A0A1W2PPZ6 126 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TCRBV5S2A0A599 114 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 CLOCKO15516 846 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 SEC14L2O76054 403 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 IGF2P01344 180 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 GPR4P46093 362 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 ZNF83P51522 516 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 IST1P53990 364 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 NR1H2P55055 460 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TUBA1BP68363 451 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TUBA4AP68366 448 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 ARF1P84077 181 aaKnown RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 TGFBR3Q03167 851 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 PRKCDQ05655 676 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 BSPH1Q075Z2 132 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TRIM25Q14258 630 aaKnown RBP11.11□□□□□ -0.63
LSM5-201ENST00000223084 CEACAM16Q2WEN9 425 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 TBRG1Q3YBR2 411 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 NCMAPQ5T1S8 102 aa11.11□□□□□ -0.63
LSM5-201ENST00000223084 PAMR1Q6UXH9 720 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms