RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 LOC102725191A0A1B0GVB3 256 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 A0A1W2PRG6 482 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 SS18L1O75177 396 aaPredicted RBP24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 PPP1R3DO95685 299 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 YES1P07947 543 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 CLDN17P56750 224 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 MELKQ14680 651 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 SLC35D2Q76EJ3 337 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 CNEP1R1Q8N9A8 125 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 ZIC4Q8N9L1 334 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 TXNDC15Q96J42 360 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 TSSK6Q9BXA6 273 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 RIBC2Q9H4K1 309 aa24.22■■□□□ 1.47
CHMP4B-201ENST00000217402 GPR171O14626 319 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 TMIGD3P0DMS9 266 aaPredicted RBP24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 AGTR1P30556 359 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 ACKR1Q16570 336 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 TMEM201Q5SNT2 666 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 GLRX2Q9NS18 164 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 ARHGAP21Q5T5U3 1957 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 ZNF724A8MTY0 619 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 LRRTM2O43300 516 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 CD14P08571 375 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 CEACAM8P31997 349 aaPredicted RBP24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 ZIK1Q3SY52 487 aaPredicted RBP24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 TMEM211Q6ICI0 200 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 DPY19L2P2Q6ZN68 376 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 IQCF1Q8N6M8 205 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 TSPAN32Q96QS1 320 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 GPX7Q96SL4 187 aaPredicted RBP24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 EMC6Q9BV81 110 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 GP6Q9HCN6 339 aa24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 NOSIPQ9Y314 301 aaKnown RBP24.21■■□□□ 1.47
CHMP4B-201ENST00000217402 DOCK7Q96N67 2140 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 A0A0G2JNJ9 132 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 PTDSS1P48651 473 aaKnown RBP24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 RAD23AP54725 363 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 RIPPLY2Q5TAB7 128 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 NHLRC1Q6VVB1 395 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 FAM214BQ7L5A3 538 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 ZC3HAV1Q7Z2W4 902 aaKnown RBP24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 MED12LQ86YW9 2145 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 Q9UFV3 132 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 EMC9Q9Y3B6 208 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 IER3IP1Q9Y5U9 82 aa24.2■■□□□ 1.46
CHMP4B-201ENST00000217402 BCL10O95999 233 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 EPHA2P29317 976 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 NTF4P34130 210 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 POLR2IP36954 125 aaKnown RBP24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 DAP3P51398 398 aaKnown RBP24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 CRISP1P54107 249 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 BIDP55957 195 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 GUSBP1Q15486 140 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 CASP12Q6UXS9 341 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 NUFIP2Q7Z417 695 aaKnown RBP24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 WDFY1Q8IWB7 410 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 PACRGLQ8N7B6 248 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 ZNF570Q96NI8 536 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 ZFP3Q96NJ6 502 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 ERMAPQ96PL5 475 aaPredicted RBP24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 TXNIPQ9H3M7 391 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 C12orf49Q9H741 205 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 NRIP3Q9NQ35 241 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 ENOPH1Q9UHY7 261 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 ZNF346Q9UL40 294 aaKnown RBP24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 ESPL1Q14674 2120 aa24.19■■□□□ 1.46
CHMP4B-201ENST00000217402 A0A1B0GUH1 482 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 CDH2P19022 906 aaPredicted RBP24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 ESRRGP62508 458 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 TMEM236Q5W0B7 351 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 NIPAL3Q6P499 406 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 OR2T33Q8NG76 320 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 OR4Q3Q8NH05 313 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 RND1Q92730 232 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 Q96M85 177 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 TACO1Q9BSH4 297 aaKnown RBP24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 GABARAPL3Q9BY60 117 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 VCXQ9H320 206 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 C8orf4Q9NR00 106 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 GRHPRQ9UBQ7 328 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 RELNP78509 3460 aa24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 PHF3Q92576 2039 aaKnown RBP24.18■■□□□ 1.46
CHMP4B-201ENST00000217402 SLC35F4A4IF30 521 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 BHLHE40O14503 412 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 SNAP29O95721 258 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 IGHMP01871 453 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 KIR2DL2P43627 348 aaPredicted RBP24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 RPL27P61353 136 aaKnown RBP24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 NPRL3Q12980 569 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 VWA1Q6PCB0 445 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 AAED1Q7RTV5 226 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 FAM122BQ7Z309 247 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 ASB10Q8WXI3 467 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 RASD2Q96D21 266 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 TOR3AQ9H497 397 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 SMPD3Q9NY59 655 aaPredicted RBP24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 TEX13CA0A0J9YWL9 993 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 MRPL33O75394 65 aaKnown RBP24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 TNFSF13O75888 250 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 NOS3P29474 1203 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms