RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 GDPD3Q7L5L3 318 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 CPEB2Q7Z5Q1 589 aaKnown RBP13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 ZNF775Q96BV0 537 aaPredicted RBP13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 C10orf90Q96M02 699 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 STACQ99469 402 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 C20orf85Q9H1P6 137 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 MPGP29372 298 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 AGFG1P52594 562 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 ENTPD8Q5MY95 495 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 LCN8Q6JVE9 175 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 KLHDC1Q8N7A1 406 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 APH1BQ8WW43 257 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 H3BVH4 76 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 OR7C2O60412 319 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 TPMTP51580 245 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 H3F3AP84243 136 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 POU3F1Q03052 451 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC36A2Q495M3 483 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 FOXJ1Q92949 421 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 TMEM175Q9BSA9 504 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 UCK1Q9HA47 277 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 KPTNQ9Y664 436 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 LGI1O95970 557 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 TAGLNQ01995 201 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 TMEM182Q6ZP80 229 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 NECAP2Q9NVZ3 263 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 UMAD1C9J7I0 102 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 PDGFBP01127 241 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 GSCP56915 257 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC17A1Q14916 467 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC2A9Q9NRM0 540 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 PHOX2AO14813 284 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 OR5H8P0DN80 308 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 PGGT1BP53609 377 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 HSD17B11Q8NBQ5 300 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 OR10AD1Q8NGE0 317 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 ZMAT3Q9HA38 289 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 BOKQ9UMX3 212 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 ZNF443Q9Y2A4 671 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 SDHDO14521 159 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC35E2BP0CK96 405 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 RGNQ15493 299 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC46A3Q7Z3Q1 461 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 EMG1Q92979 244 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 DCBLD2Q96PD2 775 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 MED20Q9H944 212 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 DUSP13Q9UII6 198 aa13.61□□□□□ -0.23
SPTLC2-201ENST00000216484 GATCO43716 136 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 ETV6P41212 452 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 RAD52P43351 418 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 MDGA2Q7Z553 956 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 IMP4Q96G21 291 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 SCGB1A1P11684 91 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 GPLD1P80108 840 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 LPAL2Q16609 132 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 C18orf21Q32NC0 220 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 PNPLA1Q8N8W4 532 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 TCTN2Q96GX1 697 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 PKMYT1Q99640 499 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 TMEM43Q9BTV4 400 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 HTR4Q13639 388 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 CLEC9AQ6UXN8 241 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 TUSC5Q8IXB3 177 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 LFNGQ8NES3 379 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 GPR32P1Q8NGA4 272 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 RBPMSQ93062 196 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 MAF1Q9H063 256 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 C1GALT1Q9NS00 363 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 PPP1R3CQ9UQK1 317 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 ROBO1Q9Y6N7 1651 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 YKT6O15498 198 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 ICMTO60725 284 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 F13BP05160 661 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 SH3BP2P78314 561 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC35E1Q96K37 410 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 C1QTNF2Q9BXJ5 285 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 SPHK2Q9NRA0 654 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 AK3Q9UIJ7 227 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 PCDHGA9Q9Y5G4 932 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 KIAA2026Q5HYC2 2103 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 ZNF593O00488 134 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 WBP2NLQ6ICG8 309 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 OR51A4Q8NGJ6 313 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 OR51A2Q8NGJ7 313 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 B3GAT1Q9P2W7 334 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 TO15178 435 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 PEX10O60683 326 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 CD46P15529 392 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 CLDN12P56749 244 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC6A19Q695T7 634 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 DHRS7BQ6IAN0 325 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 CISD2Q8N5K1 135 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 LINC00597Q9H2U6 94 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 DEGS1O15121 323 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 H2AFB1P0C5Y9 115 aa13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 ATXN1LP0C7T5 689 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-201ENST00000216484 NDUFB7P17568 137 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms