RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 BBS10Q8TAM1 723 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 BCL2L2Q92843 193 aaPredicted RBP13.06□□□□□ -0.32
UPK3A-201ENST00000216211 LRRC58Q96CX6 371 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 SORCS2Q96PQ0 1159 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 KCNS3Q9BQ31 491 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 RSPO3Q9BXY4 272 aaPredicted RBP13.06□□□□□ -0.32
UPK3A-201ENST00000216211 NELFAQ9H3P2 528 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 RAD21L1Q9H4I0 556 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 BCL2L10Q9HD36 194 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 SPAG4Q9NPE6 437 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 RPS6KB2Q9UBS0 482 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 CD300AQ9UGN4 299 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 ARPC4-TTLL3A0A0A6YYG9 625 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 OR6C65A6NJZ3 312 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 C5orf58C9J3I9 102 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 FXYD1O00168 92 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 FKBP6O75344 327 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 CSF3P09919 207 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 BMP2P12643 396 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
UPK3A-201ENST00000216211 ZNF43P17038 809 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 ROR2Q01974 943 aaKnown RBP13.05□□□□□ -0.32
UPK3A-201ENST00000216211 FADDQ13158 208 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 PAGE3Q5JUK9 113 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 SAMD4BQ5PRF9 694 aaKnown RBP13.05□□□□□ -0.32
UPK3A-201ENST00000216211 NFKBIDQ8NI38 313 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 KCNK17Q96T54 332 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 KATNB1Q9BVA0 655 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 LINC00470Q9BZP3 86 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 SEC61A2Q9H9S3 476 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 SLC25A37Q9NYZ2 338 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 ADA2Q9NZK5 511 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 SLAMF8Q9P0V8 285 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 ABCD2Q9UBJ2 740 aa13.05□□□□□ -0.32
UPK3A-201ENST00000216211 RNF212BA8MTL3 300 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 CRYAAP02489 173 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 CECR9P0C854 216 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 IGHV4-31P0DP07 118 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 USF1P22415 310 aaPredicted RBP13.04□□□□□ -0.32
UPK3A-201ENST00000216211 HTR2AP28223 471 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 CALCRP30988 508 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 PDLIM4P50479 330 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 SNRPD2P62316 118 aaKnown RBP13.04□□□□□ -0.32
UPK3A-201ENST00000216211 NAAAQ02083 359 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 TRAP1Q12931 704 aaKnown RBP13.04□□□□□ -0.32
UPK3A-201ENST00000216211 NFYCQ13952 458 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 CCNIQ14094 377 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 CYB5R2Q6BCY4 276 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 ANKRD16Q6P6B7 361 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 VHLLQ6RSH7 139 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 COMTD1Q86VU5 262 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 MSRB3Q8IXL7 192 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 C10orf111Q8N326 155 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 MAGEE2Q8TD90 523 aaPredicted RBP13.04□□□□□ -0.32
UPK3A-201ENST00000216211 PROX1Q92786 737 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 STMN2Q93045 179 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 TAAR8Q969N4 342 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 SLC35B4Q969S0 331 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 VRK1Q99986 396 aaPredicted RBP13.04□□□□□ -0.32
UPK3A-201ENST00000216211 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
UPK3A-201ENST00000216211 PRR14Q9BWN1 585 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 CA10Q9NS85 328 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 B3GAT1Q9P2W7 334 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 CRNNQ9UBG3 495 aaPredicted RBP13.04□□□□□ -0.32
UPK3A-201ENST00000216211 FKBP7Q9Y680 259 aa13.04□□□□□ -0.32
UPK3A-201ENST00000216211 A0A1B0GWA3 101 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 M0R082 166 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ACOT8O14734 319 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 SLC43A1O75387 559 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 KRT36O76013 467 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ZNF432O94892 652 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 CELA3BP08861 270 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ARAFP10398 606 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 HSD17B1P14061 328 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ETS2P15036 469 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 CBLP22681 906 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 PAX7P23759 505 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 SLC6A2P23975 617 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 PRKAR1BP31321 381 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 SERPINF1P36955 418 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ARF1P84077 181 aaKnown RBP13.03□□□□□ -0.32
UPK3A-201ENST00000216211 IL1RL1Q01638 556 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 GGTLC2Q14390 218 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 GCNT6Q5T4J0 391 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 DLEU7Q6UYE1 221 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 SLC46A3Q7Z3Q1 461 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ARPINQ7Z6K5 226 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 MYPOPQ86VE0 399 aaPredicted RBP13.03□□□□□ -0.32
UPK3A-201ENST00000216211 SLC15A3Q8IY34 581 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ZNF417Q8TAU3 575 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 CCDC124Q96CT7 223 aaKnown RBP13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ZNF837Q96EG3 531 aaPredicted RBP13.03□□□□□ -0.32
UPK3A-201ENST00000216211 OXGR1Q96P68 337 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 ZNF587Q96SQ5 575 aaPredicted RBP13.03□□□□□ -0.32
UPK3A-201ENST00000216211 C12orf10Q9HB07 376 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 GPR35Q9HC97 309 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 STX18Q9P2W9 335 aaKnown RBP13.03□□□□□ -0.32
UPK3A-201ENST00000216211 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms