RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Q8BHR8 331 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tcf19Q99KJ5 263 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 RlimQ9WTV7 600 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr115B2RTB9 312 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm15446D3Z5Y8 553 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr225E9PWF9 419 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dcpp2E9PYC2 171 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn2r82G3UWA2 865 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp871G5E905 615 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dcpp1L7N1X9 171 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 HgdO09173 445 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Kcnk3O35111 409 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 GzmdP11033 252 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pou3f3P31361 497 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Kndc1Q0KK55 1742 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 AbraclQ4KML4 81 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 EngQ63961 653 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tas2r40Q7TQB8 319 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr314Q7TRZ7 330 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cldn34b3Q80ZS5 209 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Stk17bQ8BG48 372 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rrnad1Q8BZG5 475 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mr1Q8HWB0 341 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cd207Q8VBX4 331 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rab31Q921E2 194 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rad9aQ9Z0F6 389 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Alox5apP30355 161 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 CebpgP53568 150 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 CtnsP57757 367 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mblac2Q8BL86 279 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 QdprQ8BVI4 241 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Treml1Q8K558 317 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ubap2Q91VX2 1132 aaKnown RBP9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Supt7lQ9CZV5 412 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Borcs8Q9D6Y4 120 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fkbp1bQ9Z2I2 108 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rpl23a-ps3A0A140T8M7 156 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp619G3X9T2 1161 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 HbaP01942 142 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Elk1P41969 429 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hmx2P43687 273 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rpl23aP62751 156 aaKnown RBP9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Glt8d1Q6NSU3 371 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Exosc3Q7TQK4 274 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tmem62Q8BXJ9 643 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Q8C4P0 716 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Nsun5Q8K4F6 465 aaKnown RBP9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr161Q8VGB9 313 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tmprss11dQ8VHK8 417 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Arr3Q9EQP6 381 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc35a2Q9R0M8 390 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 CK137956B1AYM9 596 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr427E9Q7E7 315 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 5730507C01RikJ3QPX0 416 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn2r109K7N747 858 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Il10rbQ61190 349 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fkbp10Q61576 581 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Marveld1Q7TQJ1 173 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr128Q7TRJ1 308 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mrps10Q80ZK0 160 aaKnown RBP9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Orai1Q8BWG9 304 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr291Q8VF60 317 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr353Q8VGK0 311 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Six6Q9QZ28 246 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm21834J3QN05 151 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Smpd2O70572 419 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1031Q7TR87 336 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Clec4a1Q80UI7 245 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn1r210Q8R274 306 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mboat2Q8R3I2 519 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1254Q8VFB1 314 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pcdhga3Q91XY5 928 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 P2ry14Q9ESG6 338 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Adam23Q9R1V7 829 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ppp1r3dA2AJW4 279 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm8265K7N6Y8 158 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Srsf5O35326 269 aaKnown RBP9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Wsb1O54927 421 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Clec10aP49300 304 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 RabggtbP53612 339 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Has2P70312 552 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rhox10Q4TU83 196 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Amer3Q6NS69 780 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gpr62Q80UC6 358 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fam69cQ8BQT2 410 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Sgk3Q9ERE3 496 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr221B2RVX8 311 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ephb6O08644 1014 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 P01636 108 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 ArafP04627 604 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Samd12Q0VE29 161 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dvl2Q60838 736 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cox8aQ64445 69 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1299Q7TQX5 312 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ubr7Q8BU04 425 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc35b4Q8CIA5 331 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ctxn1Q8K129 82 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vsx1Q91V10 363 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tnk1Q99ML2 666 aa9.47□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dnmt3lQ9CWR8 421 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms