RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PCSK6P29122 969 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 GSSP48637 474 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 CLK1P49759 484 aaKnown RBP8.4□□□□□ -1.06
PHGDH-228ENST00000641847 LHX2P50458 406 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 RAD23AP54725 363 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TPD52P55327 224 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-228ENST00000641847 CLDN20P56880 219 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 NUP107P57740 925 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 OR2B6P58173 313 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 HSF1Q00613 529 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TFF3Q07654 80 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TSPAN31Q12999 210 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 KEAP1Q14145 624 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 GXYLT1Q4G148 440 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 NHSL2Q5HYW2 709 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 KLHL17Q6TDP4 642 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 IZUMO2Q6UXV1 221 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 ESPNLQ6ZVH7 1005 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 MEIOBQ8N635 442 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 LRRC17Q8N6Y2 441 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 OR6S1Q8NH40 331 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 OR2V1Q8NHB1 315 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 FANK1Q8TC84 345 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 ABTB1Q969K4 478 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-228ENST00000641847 SLC25A36Q96CQ1 311 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 MBOAT4Q96T53 435 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TACO1Q9BSH4 297 aaKnown RBP8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TAPBPLQ9BX59 468 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TP63Q9H3D4 680 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-228ENST00000641847 RIBC2Q9H4K1 309 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 FKRPQ9H9S5 495 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 NANSQ9NR45 359 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 ALKBH4Q9NXW9 302 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF229Q9UJW7 825 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 RNF6Q9Y252 685 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 HDGFL3Q9Y3E1 203 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 HIVEP2P31629 2446 aa8.4□□□□□ -1.07
PHGDH-228ENST00000641847 FN1P02751 2386 aaKnown RBP8.4□□□□□ -1.07
PHGDH-228ENST00000641847 FREM3P0C091 2139 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 A0A0J9YW62 118 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 A0A1B0GVC2 190 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 M0R082 166 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 SULT2B1O00204 365 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 AQP7O14520 342 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 FZD7O75084 574 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 WISP2O76076 250 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 PMS2P2O95744 297 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 RAF1P04049 648 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ASAH2BP0C7U1 165 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 OSMP13725 252 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF708P17019 499 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 CDH2P19022 906 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-228ENST00000641847 GRPRP30550 384 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 EIF1AXP47813 144 aaKnown RBP8.39□□□□□ -1.07
PHGDH-228ENST00000641847 SLC9A3P48764 834 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 DIO1P49895 249 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 SUCLG1P53597 346 aaKnown RBP8.39□□□□□ -1.07
PHGDH-228ENST00000641847 AQP4P55087 323 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 CLDN18P56856 261 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 RPS4XP62701 263 aaKnown RBP8.39□□□□□ -1.07
PHGDH-228ENST00000641847 MFSD13AQ14CX5 517 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 BCL2A1Q16548 175 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 CTU2Q2VPK5 515 aaKnown RBP8.39□□□□□ -1.07
PHGDH-228ENST00000641847 HBMQ6B0K9 141 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 VASNQ6EMK4 673 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 CD300LDQ6UXZ3 194 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF620Q6ZNG0 422 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 TMPPEQ6ZT21 453 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 NANOGNBQ7Z5D8 188 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 OAFQ86UD1 273 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 CD163Q86VB7 1156 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 KIF18BQ86Y91 864 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 PARP8Q8N3A8 854 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 WFDC11Q8NEX6 87 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 OR51A7Q8NH64 312 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 MFSD8Q8NHS3 518 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 FAM57AQ8TBR7 257 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 LIPHQ8WWY8 451 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ADGRG7Q96K78 797 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ASPNQ9BXN1 380 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 GABARAPL3Q9BY60 117 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 SRXN1Q9BYN0 137 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 LIME1Q9H400 295 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 TOR3AQ9H497 397 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 PLSCR2Q9NRY7 297 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 TBC1D23Q9NUY8 699 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 SMPD3Q9NY59 655 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-228ENST00000641847 SEC14L4Q9UDX3 406 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 ENOPH1Q9UHY7 261 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 CORINQ9Y5Q5 1042 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 CDH10Q9Y6N8 788 aa8.39□□□□□ -1.07
PHGDH-228ENST00000641847 MED12Q93074 2177 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 A0A1B0GTH9 108 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 H3BN98 237 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 DLGAP1O14490 977 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 ARHGEF9O43307 516 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 CXCL13O43927 109 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 AKR7A3O95154 331 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms