RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF728P0DKX0 622 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 HOXA11P31270 313 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-227ENST00000638011 RAB13P51153 203 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 SNRPGP62308 76 aaKnown RBP14.1□□□□□ -0.15
UBE3A-227ENST00000638011 RPL7L1Q6DKI1 246 aaKnown RBP14.1□□□□□ -0.15
UBE3A-227ENST00000638011 USP50Q70EL3 339 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-227ENST00000638011 OR5B3Q8NH48 314 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 FBXL18Q96ME1 805 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 TFAP2AP05549 437 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 GP2P55259 537 aaKnown RBP14.1□□□□□ -0.15
UBE3A-227ENST00000638011 CLEC1AQ8NC01 280 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 C2CD4CQ8TF44 421 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 RFPL4AA6NLU0 287 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 RFPL4AL1F8VTS6 287 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 OMGP23515 440 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 ANKRD16Q6P6B7 361 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 CISD2Q8N5K1 135 aaKnown RBP14.1□□□□□ -0.15
UBE3A-227ENST00000638011 BPIFA2Q96DR5 249 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 AK3Q9UIJ7 227 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 PEX10O60683 326 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 CHRM2P08172 466 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 GCH1P30793 250 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 ZNF90Q03938 601 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 FFAR4Q5NUL3 377 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 PLCXD3Q63HM9 321 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 OTOP2Q7RTS6 562 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 CLDN19Q8N6F1 224 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 HRASLS5Q96KN8 279 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 PLEKHF2Q9H8W4 249 aa14.1□□□□□ -0.15
UBE3A-227ENST00000638011 SLC16A7O60669 478 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ZNF91Q05481 1191 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 SLC9A3R2Q15599 337 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 SLC10A6Q3KNW5 377 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 RPUSD3Q6P087 351 aaKnown RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 LRRTM1Q86UE6 522 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 INPP5KQ9BT40 448 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 GPR174Q9BXC1 333 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 OSGIN2Q9Y236 505 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 NCOR1O75376 2440 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 CCL16O15467 120 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 CSF2RAP15509 400 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ARRB1P49407 418 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 SH3BP2P78314 561 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 Q1RN00 199 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 PGGHGQ32M88 737 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ETFRF1Q6IPR1 90 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 PELI2Q9HAT8 420 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 HRASLSQ9HDD0 168 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 KIR2DS1A0A191URI9 304 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 C4orf47A7E2U8 309 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ZNF727A8MUV8 499 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 DCTN6O00399 190 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 BPIFB3P59826 476 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 KIR2DS1Q14954 304 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 TMIGD2Q96BF3 282 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 SLC7A7Q9UM01 511 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ELOA3CA0A087WX78 387 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 A0A1B0GUH1 482 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 HSPB2A8KAH6 182 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 DHPSP49366 369 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 KIAA1024LP59773 190 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 HSPB2Q16082 182 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 IAH1Q2TAA2 248 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 LGALS14Q8TCE9 139 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 IL1F10Q8WWZ1 152 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ATG101Q9BSB4 218 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ACTR3CQ9C0K3 210 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 METTL9Q9H1A3 318 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 MYEF2Q9P2K5 600 aaKnown RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 B3GAT1Q9P2W7 334 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ILKQ13418 452 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 CARD17Q5XLA6 110 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 RTP4Q96DX8 246 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 DPH2Q9BQC3 489 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 P04436 131 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 OR10J4P0C629 311 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 GGT5P36269 586 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ZNF280AP59817 542 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ELOCQ15369 112 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 ZNF684Q5T5D7 378 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 DPH7Q9BTV6 452 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 XRCC3O43542 346 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 SDHBP21912 280 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 C21orf33P30042 268 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 RABGGTBP53611 331 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 TMPRSS11FQ6ZWK6 438 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 C14orf80Q86SX3 495 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 CSNK1A1LQ8N752 337 aa14.09□□□□□ -0.15
UBE3A-227ENST00000638011 KHSRPQ92945 711 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■□□□ 14.4
UBE3A-227ENST00000638011 C11orf54Q9H0W9 315 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-227ENST00000638011 K7ERQ8 282 aa14.08□□□□□ -0.15
UBE3A-227ENST00000638011 SIAH3Q8IW03 269 aa14.08□□□□□ -0.15
UBE3A-227ENST00000638011 OR51A2Q8NGJ7 313 aa14.08□□□□□ -0.15
UBE3A-227ENST00000638011 OR6S1Q8NH40 331 aa14.08□□□□□ -0.15
UBE3A-227ENST00000638011 CLCF1Q9UBD9 225 aa14.08□□□□□ -0.15
UBE3A-227ENST00000638011 ABCA4P78363 2273 aa14.08□□□□□ -0.15
UBE3A-227ENST00000638011 B4GAT1O43505 415 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms