RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TMEM43Q9BTV4 400 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 TMEM120AQ9BXJ8 343 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 B3GAT2Q9NPZ5 323 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 SEC14L4Q9UDX3 406 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 GDF2Q9UK05 429 aaPredicted RBP16.57■□□□□ 0.24
CLN6-221ENST00000637494 MOKQ9UQ07 419 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 IGKV1D-42A0A075B6H8 117 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 ARPC4-TTLL3A0A0A6YYG9 625 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 ATP6V1G2-DDX39BF2Z307 99 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 RPL36A-HNRNPH2H7BZ11 118 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 FZD7O75084 574 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 OPN1SWP03999 348 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 CDH12P55289 794 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 PCBP3P57721 371 aaKnown RBP16.56■□□□□ 0.24
CLN6-221ENST00000637494 LGALS3BPQ08380 585 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 MAPRE2Q15555 327 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 CLEC2AQ6UVW9 174 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 B3GLCTQ6Y288 498 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 RETREG3Q86VR2 466 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 SNX32Q86XE0 403 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 OR10A6Q8NH74 314 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 BCL2L2Q92843 193 aaPredicted RBP16.56■□□□□ 0.24
CLN6-221ENST00000637494 KAT8Q9H7Z6 458 aaKnown RBP16.56■□□□□ 0.24
CLN6-221ENST00000637494 B3GAT1Q9P2W7 334 aa16.56■□□□□ 0.24
CLN6-221ENST00000637494 USF3Q68DE3 2245 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 A0A096LPE4 126 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 A0A1W2PPZ6 126 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 M0R3H8 397 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 CHP2O43745 196 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 NDUFS7O75251 213 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 ZNF432O94892 652 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 OR6A2O95222 327 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 MT-ATP6P00846 226 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 PCGF2P35227 344 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 ARFIP2P53365 341 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 ARF1P84077 181 aaKnown RBP16.55■□□□□ 0.24
CLN6-221ENST00000637494 SELPLGQ14242 412 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 TRMT5Q32P41 509 aaKnown RBP16.55■□□□□ 0.24
CLN6-221ENST00000637494 C3orf36Q3SXR2 165 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 C11orf71Q6IPW1 123 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 CCDC36Q8IYA8 594 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 ARHGDIGQ99819 225 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 ECSITQ9BQ95 431 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 KATNB1Q9BVA0 655 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 RSPO3Q9BXY4 272 aaPredicted RBP16.55■□□□□ 0.24
CLN6-221ENST00000637494 CRLF2Q9HC73 371 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 GPR35Q9HC97 309 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 NOX1Q9Y5S8 564 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 VPS13CQ709C8 3753 aa16.55■□□□□ 0.24
CLN6-221ENST00000637494 IGHV1-18A0A0C4DH31 117 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 CPSF4LA6NMK7 179 aaKnown RBP16.54■□□□□ 0.24
CLN6-221ENST00000637494 ZNF726A6NNF4 738 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 VSTM5A8MXK1 200 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 H7C417 338 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 SASH3O75995 380 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 BGLAPP02818 100 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 AHCYP23526 432 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 CAPZA2P47755 286 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 POU3F1Q03052 451 aaPredicted RBP16.54■□□□□ 0.24
CLN6-221ENST00000637494 PUDPQ08623 228 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 DUSP7Q16829 419 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 CEACAM16Q2WEN9 425 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 ENTPD8Q5MY95 495 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 TTC33Q6PID6 262 aaPredicted RBP16.54■□□□□ 0.24
CLN6-221ENST00000637494 LINGO2Q7L985 606 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 VANGL1Q8TAA9 524 aaPredicted RBP16.54■□□□□ 0.24
CLN6-221ENST00000637494 SLC41A3Q96GZ6 507 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 OR2M2Q96R28 347 aa16.54■□□□□ 0.24
CLN6-221ENST00000637494 MRPL39Q9NYK5 338 aaKnown RBP16.54■□□□□ 0.24
CLN6-221ENST00000637494 ZFHX3Q15911 3703 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 BBIP1A8MTZ0 92 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 INAFM1C9JVW0 142 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 MS4A18H0YCH9 400 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 M0R3G1 203 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 TRAF3IP2O43734 574 aaPredicted RBP16.53■□□□□ 0.24
CLN6-221ENST00000637494 TPST2O60704 377 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 NPPAP01160 153 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 CD247P20963 164 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 SNRPD2P62316 118 aaKnown RBP16.53■□□□□ 0.24
CLN6-221ENST00000637494 VMACQ2NL98 169 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 MS4A18Q3C1V0 323 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 CARD17Q5XLA6 110 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 FAM169BQ8N8A8 192 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 MAPK1IP1LQ8NDC0 245 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 OR6T1Q8NGN1 323 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 OR6N1Q8NGY5 312 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 OR5J2Q8NH18 312 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 PROX1Q92786 737 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 FBXO17Q96EF6 278 aa16.53■□□□□ 0.24
CLN6-221ENST00000637494 TRAPPC13A5PLN9 417 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 ZNF99A8MXY4 864 aaPredicted RBP16.52■□□□□ 0.24
CLN6-221ENST00000637494 HIST1H2ABP04908 130 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 CSF3P09919 207 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 ADORA3P0DMS8 318 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 ARR3P36575 388 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 TUBA1BP68363 451 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 TUBA4AP68366 448 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 NAAAQ02083 359 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 HSP90B2PQ58FF3 399 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 COQ5Q5HYK3 327 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms