RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 RGS11O94810 467 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PAK4O96013 591 aaPredicted RBP3.65□□□□□ -1.82
SCN1A-214ENST00000637038 MT-ND4P03905 459 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 GUSBP08236 651 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PNMTP11086 282 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 SNRPBP14678 240 aaKnown RBP3.65□□□□□ -1.82
SCN1A-214ENST00000637038 AK4P27144 223 aaPredicted RBP3.65□□□□□ -1.82
SCN1A-214ENST00000637038 AGTR1P30556 359 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 MNDAP41218 407 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 ACTR1BP42025 376 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 TNFRSF4P43489 277 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 KIAA1024LP59773 190 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 ACTR1AP61163 376 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PRRT3Q5FWE3 981 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 TOR2AQ5JU69 321 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 C3P1Q6ZMU1 363 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 WDR88Q6ZMY6 472 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 OLIG3Q7RTU3 272 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PXKQ7Z7A4 578 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 GLCCI1Q86VQ1 547 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PAQR7Q86WK9 346 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 SPICQ8N5J4 248 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 AVL9Q8NBF6 648 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 OR10G6Q8NH81 332 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 RHBDD1Q8TEB9 315 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 OIT3Q8WWZ8 545 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 WNT2BQ93097 391 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 LRRC46Q96FV0 321 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 REPIN1Q9BWE0 567 aaKnown RBP3.65□□□□□ -1.82
SCN1A-214ENST00000637038 SLC19A3Q9BZV2 496 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 MED20Q9H944 212 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 ERVMER34-1Q9H9K5 563 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PLEKHA1Q9HB21 404 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 CAPN10Q9HC96 672 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PRODH2Q9UF12 536 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 SLC23A1Q9UHI7 598 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 PCOLCE2Q9UKZ9 415 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 SIGLEC7Q9Y286 467 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 GPR55Q9Y2T6 319 aaPredicted RBP3.65□□□□□ -1.82
SCN1A-214ENST00000637038 CHST2Q9Y4C5 530 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 KCNE3Q9Y6H6 103 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 TMEM131Q92545 1883 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 A0A1B0GWA3 101 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 A0A1W2PP55 124 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 HIDE1A8MVS5 230 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 LEUTXA8MZ59 168 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 SMLR1H3BR10 107 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CDC40O60508 579 aaKnown RBP eCLIP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 FCMRO60667 390 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RLN1P04808 185 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CD2P06729 351 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 IFNGR1P15260 489 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 PRKACAP17612 351 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 POLR2CP19387 275 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 NUP62P37198 522 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CD79BP40259 229 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 NAA10P41227 235 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 DIO1P49895 249 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 OR12D2P58182 307 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ACTBP60709 375 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ACTG1P63261 375 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 DGCR2P98153 550 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 SSBP1Q04837 148 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 FGL1Q08830 312 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RASGEF1BQ0VAM2 473 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 BIKQ13323 160 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RUNX3Q13761 415 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 OPCMLQ14982 345 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 GSG1Q2KHT4 349 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF750Q32MQ0 723 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 GPR139Q6DWJ6 353 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 COMTD1Q86VU5 262 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CACUL1Q86Y37 369 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF676Q8N7Q3 588 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 AMER3Q8N944 861 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 TP53I13Q8NBR0 393 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ASB12Q8WXK4 309 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 YIPF5Q969M3 257 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ZMYND19Q96E35 227 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ADAD1Q96M93 576 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 AIFM2Q9BRQ8 373 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 GINS4Q9BRT9 223 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 LMF2Q9BU23 707 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 POTEKPQ9BYX7 375 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CHIAQ9BZP6 476 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ADGRL4Q9HBW9 690 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 NOX3Q9HBY0 568 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 TM7SF3Q9NS93 570 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 IKZF2Q9UKS7 526 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 DAPP1Q9UN19 280 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RCE1Q9Y256 329 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 AK6Q9Y3D8 172 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 SLC22A7Q9Y694 548 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 TRAV27A0A087WT01 109 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 A0A1W2PPL8 197 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 OR52A4PA6NMU1 304 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 IDSB3KWA1 339 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 AGRPO00253 132 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF593O00488 134 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms