RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 HEATR5AQ86XA9 2040 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 GPR179Q6PRD1 2367 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 IGKV3D-11A0A0A0MRZ8 115 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 ACOD1A6NK06 481 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 CFDP00746 253 aaPredicted RBP10.52□□□□□ -0.73
CLN6-217ENST00000636964 CSTAP01040 98 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 FPR3P25089 353 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 ZNF91Q05481 1191 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 SYT14P1Q58G82 188 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 PHF19Q5T6S3 580 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 SYT14Q8NB59 555 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 POGLUT1Q8NBL1 392 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 MARVELD1Q9BSK0 173 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 PPA2Q9H2U2 334 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 LRRN3Q9H3W5 708 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.73
CLN6-217ENST00000636964 PPP1R3EQ9H7J1 279 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 RBFOX1Q9NWB1 397 aaKnown RBP10.52□□□□□ -0.73
CLN6-217ENST00000636964 PRODH2Q9UF12 536 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 MMACHCQ9Y4U1 282 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 PMS2P1A4D2B8 440 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 RBBP9O75884 186 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 DDAH2O95865 285 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 PLAG1Q6DJT9 500 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 PWWP2BQ6NUJ5 590 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SMARCD3Q6STE5 483 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 QSOX2Q6ZRP7 698 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 KMT5CQ86Y97 462 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SLC34A3Q8N130 599 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 GDPD1Q8N9F7 314 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF721Q8TF20 911 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 CCDC74BQ96LY2 380 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF582Q96NG8 517 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 ADOQ96SZ5 270 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SOSTQ9BQB4 213 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 POLDIP3Q9BY77 421 aaKnown RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 MEPEQ9NQ76 525 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF224Q9NZL3 707 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 TESQ9UGI8 421 aaKnown RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 KLF2Q9Y5W3 355 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 KLF4O43474 513 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SGCEO43556 437 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 TRIM3O75382 744 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 TSPAN19P0C672 248 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SAGP10523 405 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 COX5BP10606 129 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 RAB3AP20336 220 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 GNG10P50151 68 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 MAB21L1Q13394 359 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 FGFBP1Q14512 234 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SSX2Q16385 188 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 ALG10BQ5I7T1 473 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF782Q6ZMW2 699 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 SHFQ7M4L6 423 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 OR51A7Q8NH64 312 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 IFI44Q8TCB0 444 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF559Q9BR84 538 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 PELOQ9BRX2 385 aaKnown RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 UFSP2Q9NUQ7 469 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SIDT1Q9NXL6 827 aaKnown RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 ING3Q9NXR8 418 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 PRRC2CQ9Y520 2896 aaKnown RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 TCRBV16S1A1N1A0A5B0 115 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 C17orf51A8MQB3 221 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 NPIPB9F8W1W9 429 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 RORAP35398 523 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 STAT5AP42229 794 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 P2RY4P51582 365 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 CCR4P51679 360 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 FCN2Q15485 313 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF141Q15928 474 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 TIMM50Q3ZCQ8 353 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 GPR139Q6DWJ6 353 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 SEZ6L2Q6UXD5 910 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 B3GLCTQ6Y288 498 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF620Q6ZNG0 422 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 FAM26EQ8N5C1 309 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 OR11H7Q8NGC8 314 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 OR13C2Q8NGS9 318 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 STT3BQ8TCJ2 826 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 BPIFA2Q96DR5 249 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 MS4A7Q9GZW8 240 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 ZNF223Q9UK11 482 aaPredicted RBP10.51□□□□□ -0.73
CLN6-217ENST00000636964 FREM2Q5SZK8 3169 aa10.51□□□□□ -0.73
CLN6-217ENST00000636964 TNRC6BQ9UPQ9 1833 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 TRAV27A0A087WT01 109 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 SERINC4A6NH21 518 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 UNC119BA6NIH7 251 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 FAM183AA6NL82 134 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 CHP2O43745 196 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 DHFRP00374 187 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 RAF1P04049 648 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 NGFRP08138 427 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 ZGLP1P0C6A0 271 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 SDHBP21912 280 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 NR0B1P51843 470 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 RIDAP52758 137 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 ELAVL1Q15717 326 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms