RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 GAAP10253 952 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 BMP4P12644 408 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 PGCP20142 388 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 PTNP21246 168 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 RPL4P36578 427 aaKnown RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 TGFBR1P36897 503 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CCR4P51679 360 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 RAB1AP62820 205 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ACTC1P68032 377 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ACTA1P68133 377 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 DBX2Q6ZNG2 339 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 Q6ZNX1 250 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ATG4DQ86TL0 474 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 GPALPP1Q8IXQ4 340 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 PRSS58Q8IYP2 241 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 EID2Q8N6I1 236 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 BBS1Q8NFJ9 593 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 OR51G2Q8NGK0 314 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 OR5M3Q8NGP4 307 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CHPT1Q8WUD6 406 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 LIPHQ8WWY8 451 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 C1GALT1C1Q96EU7 318 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 COX4I2Q96KJ9 171 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CEP19Q96LK0 163 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 KCTD7Q96MP8 289 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CNTNAP3BQ96NU0 1288 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ERMAPQ96PL5 475 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 TEAD3Q99594 435 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 TM9SF2Q99805 663 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 MED18Q9BUE0 208 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CACNG6Q9BXT2 260 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 TBL1XR1Q9BZK7 514 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ASB6Q9NWX5 421 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 FBXO4Q9UKT5 387 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 TP53BP1Q12888 1972 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 LY6G6EA0A0G2JKS1 128 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 TRDV1A0A1B0GX56 115 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ISPDA4D126 451 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 FAM183AA6NL82 134 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 LOC110117498-PIK3R3F6TDL0 507 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 IMPA2O14732 288 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ARPC3O15145 178 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 PFDN1O60925 122 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 LRP3O75074 770 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 APOL3O95236 402 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 HTR3BO95264 441 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 HIST1H2ABP04908 130 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 FGF9P31371 208 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 TAS2R43P59537 309 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 TRAM1Q15629 374 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 NDUFAF6Q330K2 333 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SLC35D3Q5M8T2 416 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SPANXN2Q5MJ10 180 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 OR2G6Q5TZ20 316 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF322Q6U7Q0 402 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SEZ6L2Q6UXD5 910 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 COX15Q7KZN9 410 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 HIST3H2AQ7L7L0 130 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 OVCH1Q7RTY7 1134 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 PPP1R3BQ86XI6 285 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 C9orf40Q8IXQ3 194 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 FAM98AQ8NCA5 519 aaKnown RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 HIST1H2ACQ93077 130 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 MR1Q95460 341 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 OMA1Q96E52 524 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 KTI12Q96EK9 354 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 LRRC46Q96FV0 321 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ARL5BQ96KC2 179 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CITED2Q99967 270 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 RNF32Q9H0A6 362 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ENKD1Q9H0I2 346 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 OR51V1Q9H2C8 321 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SEPSECSQ9HD40 501 aaKnown RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 TXNL4BQ9NX01 149 aaKnown RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 BABAM2Q9NXR7 383 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 C19orf25Q9UFG5 118 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 U3KQA8 63 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ARID1BQ8NFD5 2236 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SDK1Q7Z5N4 2213 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SERTM2A0A1B0GWG4 89 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 A0A1W2PQM1 296 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 C12orf71A8MTZ7 269 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ICOSLGO75144 302 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ALOX12BO75342 701 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SULT1C4O75897 302 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 MT-ND5P03915 603 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 GP1BBP13224 206 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CXCR1P25024 350 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ETV6P41212 452 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SLC16A1P53985 500 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 EMP2P54851 167 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 KRR1Q13601 381 aaKnown RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CBFBQ13951 182 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CRMP1Q14194 572 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 IL11RAQ14626 422 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CD226Q15762 336 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF181Q2M3W8 571 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SOWAHCQ53LP3 525 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 NCCRP1Q6ZVX7 275 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms