RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RHOXF2Q9BQY4 288 aa12.61□□□□□ -0.39
PNKP-218ENST00000625299 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
PNKP-218ENST00000625299 ASIC5Q9NY37 505 aa12.61□□□□□ -0.39
PNKP-218ENST00000625299 MYEF2Q9P2K5 600 aaKnown RBP12.61□□□□□ -0.39
PNKP-218ENST00000625299 SEC14L4Q9UDX3 406 aa12.61□□□□□ -0.39
PNKP-218ENST00000625299 RCE1Q9Y256 329 aa12.61□□□□□ -0.39
PNKP-218ENST00000625299 WNK2Q9Y3S1 2297 aa12.61□□□□□ -0.39
PNKP-218ENST00000625299 M0R3G1 203 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 SPAG7O75391 227 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 NCR1O76036 304 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 ZNF432O94892 652 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 MPZL1O95297 269 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 RPS5P46782 204 aaKnown RBP12.6□□□□□ -0.39
PNKP-218ENST00000625299 EVX1P49640 407 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 ANXA11P50995 505 aaKnown RBP12.6□□□□□ -0.39
PNKP-218ENST00000625299 TMEM33P57088 247 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 LMO4P61968 165 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 GALK2Q01415 458 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 MVKQ03426 396 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 PIGFQ07326 219 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 CASP8Q14790 479 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 CHI3L2Q15782 390 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 TRMT5Q32P41 509 aaKnown RBP12.6□□□□□ -0.39
PNKP-218ENST00000625299 LIN52Q52LA3 116 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 CARD17Q5XLA6 110 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 RIBC1Q8N443 379 aaPredicted RBP12.6□□□□□ -0.39
PNKP-218ENST00000625299 MGARPQ8TDB4 240 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 C22orf15Q8WYQ4 148 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 ZNF416Q9BWM5 594 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 AKTIPQ9H8T0 292 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 ESM1Q9NQ30 184 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 SLC52A3Q9NQ40 469 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 DUSP13Q9UII6 198 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 PPIAL4AQ9Y536 164 aa12.6□□□□□ -0.39
PNKP-218ENST00000625299 A0A0G2JMP0 313 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 A0A0X1KG70 313 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 TLDC2A0PJX2 215 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 CDHR4A6H8M9 788 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ZNF99A8MXY4 864 aaPredicted RBP12.59□□□□□ -0.39
PNKP-218ENST00000625299 CDC14BO60729 498 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 GSNP06396 782 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 PRG2P13727 222 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ANPEPP15144 967 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 SERPINB5P36952 375 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
PNKP-218ENST00000625299 NME5P56597 212 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 GSG1Q2KHT4 349 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 GLIPR1L2Q4G1C9 344 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 COX20Q5RI15 118 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ACSM5Q6NUN0 579 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 C1QL2Q7Z5L3 287 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 CCDC36Q8IYA8 594 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 PIK3C3Q8NEB9 887 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ANKK1Q8NFD2 765 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 OR4M2Q8NGB6 313 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 OR52P1PQ8NH57 321 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ZNF747Q9BV97 191 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ZNF665Q9H7R5 613 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 ZNF696Q9H7X3 374 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 PPCSQ9HAB8 311 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 G6PC2Q9NQR9 355 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 MKS1Q9NXB0 559 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 CORINQ9Y5Q5 1042 aa12.59□□□□□ -0.39
PNKP-218ENST00000625299 A0A096LPI6 279 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 CCDC154A6NI56 674 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 FTCDNL1E5RQL4 147 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 PLPP2O43688 288 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 AKAP8O43823 692 aaKnown RBP12.58□□□□□ -0.4
PNKP-218ENST00000625299 NPIPB7O75200 414 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 CBLP22681 906 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 S100A3P33764 101 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 GLRXP35754 106 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 MAGEB1P43366 347 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 PTDSS1P48651 473 aaKnown RBP12.58□□□□□ -0.4
PNKP-218ENST00000625299 RPS23P62266 143 aaKnown RBP12.58□□□□□ -0.4
PNKP-218ENST00000625299 UBA52P62987 128 aaKnown RBP12.58□□□□□ -0.4
PNKP-218ENST00000625299 FOXL1Q12952 345 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 NKPD1Q17RQ9 610 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 PHYHD1Q5SRE7 291 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 ZNF621Q6ZSS3 439 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 TRIML2Q8N7C3 387 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 ZDHHC22Q8N966 263 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 MFSD8Q8NHS3 518 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 STK35Q8TDR2 534 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 TCP10LQ8TDR4 215 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 TESCQ96BS2 214 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 OXGR1Q96P68 337 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 OR2M2Q96R28 347 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 PANX1Q96RD7 426 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 PTDSS2Q9BVG9 487 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 TMPRSS13Q9BYE2 586 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
PNKP-218ENST00000625299 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
PNKP-218ENST00000625299 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
PNKP-218ENST00000625299 E9PBE3 544 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 M0R082 166 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 RP2O75695 350 aa12.57□□□□□ -0.4
PNKP-218ENST00000625299 RAB36O95755 333 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms