RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 HLA-HP01893 362 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 BCHEP06276 602 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 ZNF35P13682 527 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 TCN1P20061 433 aaPredicted RBP9.5□□□□□ -0.89
DDX41-218ENST00000625286 HTR2AP28223 471 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 ARR3P36575 388 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 SRP14P37108 136 aaKnown RBP9.5□□□□□ -0.89
DDX41-218ENST00000625286 IL1RL1Q01638 556 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 SNTB2Q13425 540 aaKnown RBP9.5□□□□□ -0.89
DDX41-218ENST00000625286 DAG1Q14118 895 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 GNA13Q14344 377 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 LIN52Q52LA3 116 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 DEF8Q6ZN54 512 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 LRRC34Q8IZ02 419 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 CLDND2Q8NHS1 167 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 AENQ8WTP8 325 aaKnown RBP9.5□□□□□ -0.89
DDX41-218ENST00000625286 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.5□□□□□ -0.89
DDX41-218ENST00000625286 YIPF5Q969M3 257 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 TMEM19Q96HH6 336 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 ANKRD27Q96NW4 1050 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 OXGR1Q96P68 337 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 TMEM109Q9BVC6 243 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 SPATA9Q9BWV2 254 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 METTL17Q9H7H0 456 aaPredicted RBP9.5□□□□□ -0.89
DDX41-218ENST00000625286 RCE1Q9Y256 329 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 M0R082 166 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 KCNAB3O43448 404 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 SNUPNO95149 360 aaKnown RBP9.49□□□□□ -0.89
DDX41-218ENST00000625286 UQCRBP14927 111 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 ZNF14P17017 642 aaPredicted RBP9.49□□□□□ -0.89
DDX41-218ENST00000625286 ZNF43P17038 809 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 CBLP22681 906 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 PAX7P23759 505 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 EPHA3P29320 983 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 CRATP43155 626 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 ALDH3B1P43353 468 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 SH3BGRP55822 239 aaPredicted RBP9.49□□□□□ -0.89
DDX41-218ENST00000625286 COPZ1P61923 177 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 LMO4P61968 165 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 TXNL4AP83876 142 aaKnown RBP9.49□□□□□ -0.89
DDX41-218ENST00000625286 PIGFQ07326 219 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 IFFO1Q0D2I5 559 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 BST1Q10588 318 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 MAD2L1BPQ15013 274 aaPredicted RBP9.49□□□□□ -0.89
DDX41-218ENST00000625286 FXNQ16595 210 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 C12orf54Q6X4T0 127 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 C20orf196Q8IYI0 205 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 C10orf111Q8N326 155 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 TRIML2Q8N7C3 387 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 FGFBP3Q8TAT2 258 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 ZNF417Q8TAU3 575 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 MAL2Q969L2 176 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 MRPL24Q96A35 216 aaKnown RBP9.49□□□□□ -0.89
DDX41-218ENST00000625286 TXNDC15Q96J42 360 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 ZNF587Q96SQ5 575 aaPredicted RBP9.49□□□□□ -0.89
DDX41-218ENST00000625286 SYT3Q9BQG1 590 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 WFDC6Q9BQY6 131 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 EMC6Q9BV81 110 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 NARFLQ9H6Q4 476 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 TPT1P8Q9HAU6 139 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 LPAR2Q9HBW0 351 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 DYNLRB1Q9NP97 96 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 TREM2Q9NZC2 230 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 P2RX2Q9UBL9 471 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 REV1Q9UBZ9 1251 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 METRNQ9UJH8 293 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 PRDM4Q9UKN5 801 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 FZR1Q9UM11 496 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 SPEF1Q9Y4P9 236 aa9.49□□□□□ -0.89
DDX41-218ENST00000625286 A0A096LPI6 279 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 LOC102725191A0A1B0GVB3 256 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 ZNF99A8MXY4 864 aaPredicted RBP9.48□□□□□ -0.89
DDX41-218ENST00000625286 B4DSR2 109 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 M0R3G1 203 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 RFXANKO14593 260 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 SLC43A1O75387 559 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 NCR1O76036 304 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 AHSA1O95433 338 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 KRT75O95678 551 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 ZCCHC18P0CG32 403 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 HOXB9P17482 250 aaPredicted RBP9.48□□□□□ -0.89
DDX41-218ENST00000625286 NCF2P19878 526 aaPredicted RBP9.48□□□□□ -0.89
DDX41-218ENST00000625286 GRPRP30550 384 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 COMPP49747 757 aaPredicted RBP9.48□□□□□ -0.89
DDX41-218ENST00000625286 DSTNP60981 165 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 POU3F1Q03052 451 aaPredicted RBP9.48□□□□□ -0.89
DDX41-218ENST00000625286 STX3Q13277 289 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 TNFAIP8L3Q5GJ75 292 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 CARD17Q5XLA6 110 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 C6orf89Q6UWU4 347 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 MAVSQ7Z434 540 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 HIF1ANQ9NWT6 349 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 CMAHPQ9Y471 501 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 TGP01266 2768 aa9.48□□□□□ -0.89
DDX41-218ENST00000625286 A0A0G2JPF8 293 aa9.47□□□□□ -0.89
DDX41-218ENST00000625286 A0A1B0GWA3 101 aa9.47□□□□□ -0.89
DDX41-218ENST00000625286 HNRNPCL2B2RXH8 293 aa9.47□□□□□ -0.89
DDX41-218ENST00000625286 HNRNPCL3B7ZW38 293 aa9.47□□□□□ -0.89
DDX41-218ENST00000625286 SPRY1O43609 319 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms