RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 LINC01590Q5TEZ4 76 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 HSD17B13Q7Z5P4 300 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 LRRTM1Q86UE6 522 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 ZDHHC1Q8WTX9 485 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 C15orf40Q8WUR7 153 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 FBXW5Q969U6 566 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 FXYD6Q9H0Q3 95 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 TCF7L1Q9HCS4 588 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 UBE2QL1A1L167 161 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 GPR75O95800 540 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 IL32P24001 234 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 HTRA4P83105 476 aaPredicted RBP17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 Q499Y3 187 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 DCAF12L2Q5VW00 463 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 ULK3Q6PHR2 472 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 GLB1L2Q8IW92 636 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 OR4C16Q8NGL9 310 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 FGF22Q9HCT0 170 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 ZC4H2Q9NQZ6 224 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 PILRAQ9UKJ1 303 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 H7C417 338 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 ADH7P40394 386 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 FAM53BQ14153 422 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 UBXN2BQ14CS0 331 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 PCGF3Q3KNV8 242 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 VITQ6UXI7 678 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 OR2AK2Q8NG84 335 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 OR5T3Q8NGG3 340 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 CTHRC1Q96CG8 243 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 SLITRK2Q9H156 845 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 RSPH9Q9H1X1 276 aaPredicted RBP17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 MKKSQ9NPJ1 570 aaPredicted RBP17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 MED11Q9P086 117 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 MTFP1Q9UDX5 166 aa17.88■□□□□ 0.45
PDLIM3-212ENST00000620787 URADA6NGE7 173 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 FAM171A2A8MVW0 826 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 F5H5P2 479 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 CYR61O00622 381 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 ARPC3O15145 178 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 GLCEO94923 617 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 RPP14O95059 124 aaKnown RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 CBX7O95931 251 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 IGKV1D-16P01601 117 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 MAZP56270 477 aaKnown RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 UBE2MP61081 183 aaKnown RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 ERVK-25P63136 954 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 SGCGQ13326 291 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 MELKQ14680 651 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF660Q6AZW8 331 aaPredicted RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 FCRL6Q6DN72 434 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 ABHD13Q7L211 337 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 HOXB13Q92826 284 aaPredicted RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 Q96M85 177 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 SRMSQ9H3Y6 488 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 FBXL2Q9UKC9 423 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 HEATR5AQ86XA9 2040 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 SPTBP11277 2137 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 C4orf47A7E2U8 309 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 GOSR2O14653 212 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 UPK3AO75631 287 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 OR8G3PP0DMU2 310 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 CSRP1P21291 193 aaKnown RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 SOX2P48431 317 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 LTBQ06643 244 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 SLC6A19Q695T7 634 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 DGAT2L6Q6ZPD8 337 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 CDH26Q8IXH8 852 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 EIF4E3Q8N5X7 224 aaKnown RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 OR4D10Q8NGI6 311 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 APOOQ9BUR5 198 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 ALG12Q9BV10 488 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 GPR160Q9UJ42 338 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF346Q9UL40 294 aaKnown RBP17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 KLHDC2Q9Y2U9 406 aa17.87■□□□□ 0.45
PDLIM3-212ENST00000620787 TRBV5-5A0A0J9YX44 114 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 NUPL2O15504 423 aaKnown RBP17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 RBBP9O75884 186 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 TPPPO94811 219 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF10P21506 573 aaPredicted RBP17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 FAUP35544 74 aaKnown RBP17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 TPMTP51580 245 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 PDGFRLQ15198 375 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 ZMYND11Q15326 602 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 NDUFAF6Q330K2 333 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 TMPRSS12Q86WS5 348 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 PDZD9Q8IXQ8 264 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 MUC20Q8N307 709 aaPredicted RBP17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF511Q8NB15 262 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 OR4N2Q8NGD1 307 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 OR52R1Q8NGF1 315 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 OR5M9Q8NGP3 310 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 OR5AK2Q8NH90 309 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 RXFP3Q9NSD7 469 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 MPDZO75970 2070 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 TMEM272A0A1B0GTI8 110 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 CHURC1-FNTBB4DL54 471 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 XRCC3O43542 346 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 TNFSF14O43557 240 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 AQP8O94778 261 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 ALKBH1Q13686 389 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms