RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 SLC47A1Q96FL8 570 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 OR52B2Q96RD2 323 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 PTDSS2Q9BVG9 487 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
UPF3B-204ENST00000619445 DENND2DQ9H6A0 471 aaPredicted RBP10.38□□□□□ -0.75
UPF3B-204ENST00000619445 TMEM27Q9HBJ8 222 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 B3GAT2Q9NPZ5 323 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 KCNS2Q9ULS6 477 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 USP22Q9UPT9 525 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 CHST2Q9Y4C5 530 aa10.38□□□□□ -0.75
UPF3B-204ENST00000619445 VWC2LB2RUY7 222 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 LMX1BO60663 402 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 UPK3AO75631 287 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 C8BP07358 591 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 OR4A8P0C604 315 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 CECR9P0C854 216 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 ARAFP10398 606 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 SLC6A2P23975 617 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 NR4A2P43354 598 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 CDK6Q00534 326 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 EGR4Q05215 589 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 MST1LQ2TV78 715 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 GTDC1Q4AE62 458 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 FAM166AQ6J272 317 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 RANBP3LQ86VV4 465 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-204ENST00000619445 NEU4Q8WWR8 484 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-204ENST00000619445 SPDL1Q96EA4 605 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 KTI12Q96EK9 354 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-204ENST00000619445 LRR1Q96L50 414 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 VRK1Q99986 396 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-204ENST00000619445 CCDC28BQ9BUN5 200 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 ASPNQ9BXN1 380 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 PLK3Q9H4B4 646 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 RABEP2Q9H5N1 569 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 TMEM38AQ9H6F2 299 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 TMBIM4Q9HC24 238 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 FBXL3Q9UKT7 428 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 SPEF1Q9Y4P9 236 aa10.37□□□□□ -0.75
UPF3B-204ENST00000619445 ANK3Q12955 4377 aaKnown RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 A0A1B0GWA3 101 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 ZNF99A8MXY4 864 aaPredicted RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 M0R082 166 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 IGHV4-31P0DP07 118 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 NPR2P20594 1047 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 IDH3GP51553 393 aaPredicted RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 RGS8P57771 180 aaPredicted RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 ARF1P84077 181 aaKnown RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 IL1RL1Q01638 556 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 POU3F1Q03052 451 aaPredicted RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 ADIPOQQ15848 244 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 AGBL2Q5U5Z8 902 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 SLC2A7Q6PXP3 512 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 MAVSQ7Z434 540 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 UEVLDQ8IX04 471 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 ZNF417Q8TAU3 575 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 LRRC8CQ8TDW0 803 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 HTRA1Q92743 480 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 MAL2Q969L2 176 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 SORCS2Q96PQ0 1159 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 ZNF587Q96SQ5 575 aaPredicted RBP10.36□□□□□ -0.75
UPF3B-204ENST00000619445 CRLF2Q9HC73 371 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 GPR35Q9HC97 309 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 B3GAT1Q9P2W7 334 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 NOX1Q9Y5S8 564 aa10.36□□□□□ -0.75
UPF3B-204ENST00000619445 A0A087WUJ7 227 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 A0A096LPE4 126 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 A0A1W2PPZ6 126 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 FMO6PO60774 539 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 MT-ATP6P00846 226 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 NUDT7P0C024 238 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 APEHP13798 732 aaKnown RBP10.35□□□□□ -0.75
UPF3B-204ENST00000619445 HOXB9P17482 250 aaPredicted RBP10.35□□□□□ -0.75
UPF3B-204ENST00000619445 GRPRP30550 384 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 EVX1P49640 407 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 ATP4BP51164 291 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 GGTLC2Q14390 218 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 CEACAM16Q2WEN9 425 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 IQCCQ4KMZ1 466 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 REP15Q6BDI9 236 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 HIPK4Q8NE63 616 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 NFKBIDQ8NI38 313 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 STON2Q8WXE9 905 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 TAAR8Q969N4 342 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 SLC41A3Q96GZ6 507 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 OR2M2Q96R28 347 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 TMEM43Q9BTV4 400 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 NELFAQ9H3P2 528 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 KLHL14Q9P2G3 628 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 ANGPT4Q9Y264 503 aa10.35□□□□□ -0.75
UPF3B-204ENST00000619445 LOC100289279A0A1B0GTE1 492 aa10.34□□□□□ -0.75
UPF3B-204ENST00000619445 ZNF726A6NNF4 738 aa10.34□□□□□ -0.75
UPF3B-204ENST00000619445 hCG_2039718K7EN88 272 aa10.34□□□□□ -0.75
UPF3B-204ENST00000619445 NR5A2O00482 541 aa10.34□□□□□ -0.75
UPF3B-204ENST00000619445 TRAF3IP2O43734 574 aaPredicted RBP10.34□□□□□ -0.75
UPF3B-204ENST00000619445 ZNF16P17020 682 aaPredicted RBP10.34□□□□□ -0.75
UPF3B-204ENST00000619445 ZNF23P17027 643 aa10.34□□□□□ -0.75
UPF3B-204ENST00000619445 GPX2P18283 190 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms