RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TSPAN2O60636 221 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 HLA-DQA2P01906 255 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 DIO1P49895 249 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 GBX2P52951 348 aaPredicted RBP11.27□□□□□ -0.61
CIITA-212ENST00000618207 PPP3R1P63098 170 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 ACTC1P68032 377 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 ACTA1P68133 377 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 SELENBP1Q13228 472 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 ZSWIM7Q19AV6 140 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 ESPNLQ6ZVH7 1005 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 SLITRK4Q8IW52 837 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 DEFB123Q8N688 67 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 OR6N2Q8NGY6 317 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 SLC25A18Q9H1K4 315 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 NCDNQ9UBB6 729 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 TRAPPC4Q9Y296 219 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 EML6Q6ZMW3 1958 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 A0A0X1KG70 313 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 OR2T7P0C7T2 308 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 EVI2BP34910 448 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 RPS4XP62701 263 aaKnown RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 RNF4P78317 190 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 SIRPAP78324 504 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 POU4F2Q12837 409 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 BIKQ13323 160 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 QPRTQ15274 297 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 TRIQKQ629K1 86 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 MTFR2Q6P444 385 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 ASB18Q6ZVZ8 466 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 KANSL1Q7Z3B3 1105 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 AKAP14Q86UN6 197 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 PM20D2Q8IYS1 436 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 OR4M2Q8NGB6 313 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 OR2T27Q8NH04 317 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 TSPAN32Q96QS1 320 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 LAT2Q9GZY6 243 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 EVA1AQ9H8M9 152 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 WDR76Q9H967 626 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 ENAMQ9NRM1 1142 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 INPP5EQ9NRR6 644 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 HAO2Q9NYQ3 351 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 HIF3AQ9Y2N7 669 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 KLHDC2Q9Y2U9 406 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 GUSBP08236 651 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 ASAH2BP0C7U1 165 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 GP1BBP13224 206 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 INPP1P49441 399 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 EVX1P49640 407 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 BDH1Q02338 343 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 KRR1Q13601 381 aaKnown RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 CCDC157Q569K6 752 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 MESTQ5EB52 335 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 ZNF57Q68EA5 555 aaPredicted RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 DMKNQ6E0U4 476 aaPredicted RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 RHBDD2Q6NTF9 364 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 SFXN4Q6P4A7 337 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 DPY19L4Q7Z388 723 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 PRSS42Q7Z5A4 293 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 ZNF433Q8N7K0 673 aaPredicted RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 C19orf18Q8NEA5 215 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 IL17RDQ8NFM7 739 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 GPR119Q8TDV5 335 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 CCDC74BQ96LY2 380 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 ADAD1Q96M93 576 aaKnown RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 COQ7Q99807 217 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 WACQ9BTA9 647 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 GTPBP2Q9BX10 602 aaKnown RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
CIITA-212ENST00000618207 OCIAD1Q9NX40 245 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 ST6GALNAC2Q9UJ37 374 aa11.26□□□□□ -0.61
CIITA-212ENST00000618207 IGHV5-10-1A0A0J9YXX1 117 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 ARPC3O15145 178 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SUSD5O60279 629 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 EIF4EP06730 217 aaKnown RBP11.25□□□□□ -0.61
CIITA-212ENST00000618207 SNRPBP14678 240 aaKnown RBP11.25□□□□□ -0.61
CIITA-212ENST00000618207 IL11P20809 199 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 ADH7P40394 386 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SOX2P48431 317 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 RAB25P57735 213 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 MELKQ14680 651 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 NR0B2Q15466 257 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 LCN1P1Q5VSP4 162 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 PAPD4Q6PIY7 484 aaKnown RBP11.25□□□□□ -0.61
CIITA-212ENST00000618207 ZNF517Q6ZMY9 492 aaPredicted RBP11.25□□□□□ -0.61
CIITA-212ENST00000618207 FAM122BQ7Z309 247 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 OR6V1Q8N148 313 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 OR4D9Q8NGE8 314 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 THEM6Q8WUY1 208 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 METTL21AQ8WXB1 218 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 BEX2Q9BXY8 128 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 HDHD2Q9H0R4 259 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 RXFP3Q9NSD7 469 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 MED11Q9P086 117 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 RARRES3Q9UL19 164 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
CIITA-212ENST00000618207 NPFFR2Q9Y5X5 522 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms