RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 SLC25A32Q9H2D1 315 aa12.31□□□□□ -0.44
PCDHA11-202ENST00000616325 ZMAT3Q9HA38 289 aaKnown RBP12.31□□□□□ -0.44
PCDHA11-202ENST00000616325 TCF7L1Q9HCS4 588 aa12.31□□□□□ -0.44
PCDHA11-202ENST00000616325 MEPEQ9NQ76 525 aaPredicted RBP12.31□□□□□ -0.44
PCDHA11-202ENST00000616325 ZNF346Q9UL40 294 aaKnown RBP12.31□□□□□ -0.44
PCDHA11-202ENST00000616325 RPH3AQ9Y2J0 694 aaPredicted RBP12.31□□□□□ -0.44
PCDHA11-202ENST00000616325 FAM96BQ9Y3D0 163 aa12.31□□□□□ -0.44
PCDHA11-202ENST00000616325 TMEM218A2RU14 115 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 POM121BA6NF01 834 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 SLC22A31A6NKX4 558 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 IMPA2O14732 288 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 PAPLNO95428 1278 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 ZGLP1P0C6A0 271 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 ZNF888P0CJ79 500 aaPredicted RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 FOSL1P15407 271 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 FPR3P25089 353 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 AK4P27144 223 aaPredicted RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 S100A12P80511 92 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 ZNF85Q03923 595 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 GTPBP8Q8N3Z3 284 aaPredicted RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 C10orf53Q8N6V4 93 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 OR52E1Q8NGJ3 308 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 OR2S2Q9NQN1 319 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 STARD5Q9NSY2 213 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 TRAV18A0A075B6X5 111 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 NAP1L6A6NFF2 107 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 OR6C76A6NM76 312 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 MPTX1A8MV57 137 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 GRXCR1A8MXD5 290 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 EMC8O43402 210 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 RAD1O60671 282 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 NDUFB6O95139 128 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 ITGB8P26012 769 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 RFC3P40938 356 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 PPT1P50897 306 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 TDGQ13569 410 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 MLF2Q15773 248 aaPredicted RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 DUSP5Q16690 384 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 OR2A1Q8NGT9 310 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 CASTOR1Q8WTX7 329 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 MS4A6EQ96DS6 147 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 ZC3H10Q96K80 434 aaKnown RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 WDR77Q9BQA1 342 aaPredicted RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 HRH4Q9H3N8 390 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 A0A1W2PPV9 198 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 HMSDA8MTL9 139 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 FAUP35544 74 aaKnown RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 SIRPAP78324 504 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 REEP5Q00765 189 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 PLA2G7Q13093 441 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 TMEM31Q5JXX7 168 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 WDR88Q6ZMY6 472 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 GLYATL2Q8WU03 294 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 C19orf43Q9BQ61 176 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 RSRP1Q9BUV0 290 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 C1QTNF2Q9BXJ5 285 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 EMC3Q9P0I2 261 aa12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 APOBEC3BQ9UH17 382 aaKnown RBP12.3□□□□□ -0.44
PCDHA11-202ENST00000616325 IFITM5A6NNB3 132 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 CPN1P15169 458 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 RORAP35398 523 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 TAS2R43P59537 309 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 ELAVL3Q14576 367 aaKnown RBP12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 MRPL2Q5T653 305 aaKnown RBP12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 MRM1Q6IN84 353 aaKnown RBP12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 POMZP3Q6PJE2 187 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 KCTD9Q7L273 389 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 COX18Q8N8Q8 333 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 OR56A1Q8NGH5 318 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 OR14C36Q8NHC7 312 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 SLC25A38Q96DW6 304 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 HS6ST2Q96MM7 605 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 KCNK15Q9H427 330 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 NRIP3Q9NQ35 241 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 ZNF629Q9UEG4 869 aaPredicted RBP12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 INSL6Q9Y581 213 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 COL4A6Q14031 1691 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 A0A0A6YYD5 115 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 C13orf42A0A1B0GVH6 325 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 ZNF879B4DU55 563 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 EEF1E1-BLOC1S5C9J1V9 151 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 M0QYG6 137 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 ACOT7O00154 380 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 DLSTP36957 453 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 RPS27P42677 84 aaKnown RBP12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 EPHA4P54764 986 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 ZNF836Q6ZNA1 936 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 MBOAT2Q6ZWT7 520 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 KRT77Q7Z794 578 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 NAA40Q86UY6 237 aa12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 ZNF761Q86XN6 746 aaPredicted RBP12.29□□□□□ -0.44
PCDHA11-202ENST00000616325 FAM219AQ8IW50 185 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms