RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 NKX3-1Q99801 234 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 NXF2Q9GZY0 626 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 MSI1O43347 362 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 LILRB3O75022 631 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 KDELR2P33947 212 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 TAS2R60P59551 318 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 KLRB1Q12918 225 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 PLAG1Q6DJT9 500 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 OVCH1Q7RTY7 1134 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 ZNF417Q8TAU3 575 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 PXYLP1Q8TE99 480 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SPNS1Q9H2V7 528 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 B4GALT6Q9UBX8 382 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 EEDO75530 441 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 CDS2O95674 445 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 GALTP07902 379 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 PRPS1P60891 318 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SHHQ15465 462 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 PCNPQ8WW12 178 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 RDH14Q9HBH5 336 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 AMDHD2Q9Y303 409 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 TOGARAM1Q9Y4F4 1720 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 YJEFN3A6XGL0 299 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 F2P00734 622 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SMIM17P0DL12 118 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 PRRX1P54821 245 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 RPS18P62269 152 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 ZNF528Q3MIS6 628 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 LYSMD4Q5XG99 296 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 NCR3LG1Q68D85 454 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SLC51AQ86UW1 340 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 FAM24BQ8N5W8 94 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 CASD1Q96PB1 797 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 GMLQ99445 158 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 ACTR3CQ9C0K3 210 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 OR6C3Q9NZP0 311 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 CRXO43186 299 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 PI15O43692 258 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 ALDOAP04075 364 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 TMIGD3P0DMS9 266 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 HTR1EP28566 365 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 RAC1P63000 192 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 APOFQ13790 326 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 MPEG1Q2M385 716 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 CYP27C1Q4G0S4 372 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 DUSP19Q8WTR2 217 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 RBFOX1Q9NWB1 397 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SCML1Q9UN30 329 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 RNH1P13489 461 aaKnown RBP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SGSHP51688 502 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 PIGFQ07326 219 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 LCN8Q6JVE9 175 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 RAB24Q969Q5 203 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 L3HYPDHQ96EM0 354 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SFXN2Q96NB2 322 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.67□□□□□ -1.02
COL12A1-211ENST00000615798 LAMP3Q9UQV4 416 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 LGALS8O00214 317 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 SLC16A5O15375 505 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 GSK3AP49840 483 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 Q6ZNX1 250 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 TECPR1Q7Z6L1 1165 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 ZNF383Q8NA42 475 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 MOGAT1Q96PD6 335 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 NDFIP1Q9BT67 221 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 HES2Q9Y543 173 aa8.67□□□□□ -1.02
COL12A1-211ENST00000615798 TGIF2-C20orf24A0A0A6YYL0 155 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 TMEM150CB9EJG8 249 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 BMP1P13497 986 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 WNT4P56705 351 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 SNRPEP62304 92 aaKnown RBP8.66□□□□□ -1.02
COL12A1-211ENST00000615798 ZNF66Q6ZN08 573 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 ATP5SQ99766 215 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 TMPRSS4Q9NRS4 437 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 ZNFX1Q9P2E3 1918 aaKnown RBP8.66□□□□□ -1.02
COL12A1-211ENST00000615798 NRAPQ86VF7 1730 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 FGF4P08620 206 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 EFNA1P20827 205 aaPredicted RBP8.66□□□□□ -1.02
COL12A1-211ENST00000615798 HLA-DMAP28067 261 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 CXADRP78310 365 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 GLYATL3Q5SZD4 288 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 DHRS4L2Q6PKH6 230 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 ASCL4Q6XD76 172 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 MBOAT1Q6ZNC8 495 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 OR6N1Q8NGY5 312 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 LRR1Q96L50 414 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 MYOTQ9UBF9 498 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 SOCS2O14508 198 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 TMEM225BP0DP42 221 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 CTSSP25774 331 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 MLF1P58340 268 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 ACSM1Q08AH1 577 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 TAF10Q12962 218 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 SBSNQ6UWP8 590 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 CDS1Q92903 461 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 RPL10LQ96L21 214 aaKnown RBP8.66□□□□□ -1.02
COL12A1-211ENST00000615798 CXorf58Q96LI9 332 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 G6PC3Q9BUM1 346 aa8.66□□□□□ -1.02
COL12A1-211ENST00000615798 TMEM106CQ9BVX2 250 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms