RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 ZNF585AQ6P3V2 769 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TUBA1AQ71U36 451 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TRAPPC6BQ86SZ2 158 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 GCNT2Q8N0V5 402 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 BAHD1Q8TBE0 780 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 MAFIPQ8WZ33 124 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ZNF582Q96NG8 517 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 DPCDQ9BVM2 203 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 PIGUQ9H490 435 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 OCEL1Q9H607 264 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ACOXLQ9NUZ1 547 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SLC5A6Q9Y289 635 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 BRCA1P38398 1863 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 SCN8AQ9UQD0 1980 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 GREB1Q4ZG55 1949 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CHD8Q9HCK8 2581 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 USP54Q70EL1 1684 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 A0A1B0GTH9 108 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ISPDA4D126 451 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 KLHL33A6NCF5 533 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 C4orf47A7E2U8 309 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 AGAP14A8MT82 685 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 GABRPO00591 440 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CASC3O15234 703 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 MBTPS2O43462 519 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 GALR3O60755 368 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 CTNSO60931 367 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TNFSF15O95150 251 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ZNF44P15621 663 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SLC1A3P43003 542 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 HTR5AP47898 357 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PITPNAQ00169 270 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 DPTQ07507 201 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SMAD4Q13485 552 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 FZD2Q14332 565 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ADPRMQ3LIE5 342 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PDSS1Q5T2R2 415 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 WBP2NLQ6ICG8 309 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CBLN3Q6UW01 205 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TMPRSS7Q7RTY8 843 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 NRARPQ7Z6K4 114 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 RPS19BP1Q86WX3 136 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 MSRB3Q8IXL7 192 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 GPALPP1Q8IXQ4 340 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ZNF595Q8IYB9 648 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SYNPRQ8TBG9 265 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TBC1D15Q8TC07 691 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PNPLA2Q96AD5 504 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CCDC74BQ96LY2 380 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 NEDD4LQ96PU5 975 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TMEM246Q9BRR3 403 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PAPOLGQ9BWT3 736 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 SMIM3Q9BZL3 60 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 BANF2Q9H503 90 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SLC6A14Q9UN76 642 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TIMM8BQ9Y5J9 83 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 PRR14LQ5THK1 2151 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ARPC5O15511 151 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 OR7A10O76100 309 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CT62P0C5K7 136 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 OR10A3P58181 314 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 UBE2MP61081 183 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 GPR50Q13585 617 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ALKBH6Q3KRA9 238 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 MEPCEQ7L2J0 689 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 INO80EQ8NBZ0 244 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 TMEM163Q8TC26 289 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CPNE2Q96FN4 548 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 SEC22AQ96IW7 307 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CRISPLD2Q9H0B8 497 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 C20orf141Q9NUB4 165 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 UFSP2Q9NUQ7 469 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ABCD2Q9UBJ2 740 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 OSGIN1Q9UJX0 560 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CHST2Q9Y4C5 530 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 NPFFR2Q9Y5X5 522 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SCN10AQ9Y5Y9 1956 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 L7N2F9 121 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ARPC1BO15143 372 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 AK1P00568 194 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PATE4P0C8F1 98 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 STOMP27105 288 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 MNX1P50219 401 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 EFNA3P52797 238 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ART1P52961 327 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TSPAN31Q12999 210 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PDE7AQ13946 482 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SLC36A2Q495M3 483 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SPATA46Q5T0L3 261 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 B3GNTL1Q67FW5 361 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 GLCCI1Q86VQ1 547 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ADGRF3Q8IZF5 1079 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 BCORP1Q8N888 145 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 OR2T35Q8NGX2 323 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ACOT12Q8WYK0 555 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ROBO4Q8WZ75 1007 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 KLHL15Q96M94 604 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ALKBH3Q96Q83 286 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 ARL6Q9H0F7 186 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ISG20L2Q9H9L3 353 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms