RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DOK2O60496 412 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 IL33O95760 270 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 MT-ND4P03905 459 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 AHCYP23526 432 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 ARL4DP49703 201 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 PSMD4P55036 377 aaKnown RBP12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 POU4F2Q12837 409 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 PLA2G7Q13093 441 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 TDGQ13569 410 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 GGTLC2Q14390 218 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 HSD17B12Q53GQ0 312 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 SIAH3Q8IW03 269 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 OR51A4Q8NGJ6 313 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 PPP1R14AQ96A00 147 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 MARVELD1Q9BSK0 173 aa12.8□□□□□ -0.36
PCDHGA3-202ENST00000612467 A0A0A6YYJ9 748 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 CDC40O60508 579 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 AKR7A3O95154 331 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 IFI6P09912 130 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 CDK10Q15131 360 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 NTRK2Q16620 822 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 DPY19L4Q7Z388 723 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 PM20D2Q8IYS1 436 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 MS4A15Q8N5U1 240 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 POMGNT2Q8NAT1 580 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 YIPF5Q969M3 257 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 LCORQ96JN0 433 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 NUDT22Q9BRQ3 303 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 RXFP3Q9NSD7 469 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 MRM2Q9UI43 246 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 MKL2Q9ULH7 1088 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 LMO7DNF2Z398 122 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 H0YIG0 161 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 ARPC3O15145 178 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZNF217O75362 1048 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 PPM1BO75688 479 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 GLCEO94923 617 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 IGKV3-11P04433 115 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 FCER2P06734 321 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 CD14P08571 375 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 UCHL1P09936 223 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 GIFP27352 417 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 RBMS1P29558 406 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC6A1P30531 599 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 PPICP45877 212 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 ACTA2P62736 377 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 ACTG2P63267 376 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 DMWDQ09019 674 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 HYAL4Q2M3T9 481 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 PLA1AQ53H76 456 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 CMIPQ8IY22 773 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC35F3Q8IY50 421 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 OR6N2Q8NGY6 317 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZC3HAV1LQ96H79 300 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 ADAD1Q96M93 576 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 OR11A1Q9GZK7 315 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 NDEL1Q9GZM8 345 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 FSCN3Q9NQT6 498 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 IKZF2Q9UKS7 526 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 ATXN7L1Q9ULK2 861 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 CACNG2Q9Y698 323 aa12.79□□□□□ -0.36
PCDHGA3-202ENST00000612467 FREM3P0C091 2139 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 IGHV1OR21-1A0A087WYE8 117 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 ARHGEF9O43307 516 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC43A1O75387 559 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 ASAH2BP0C7U1 165 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SRMP19623 302 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 IL11P20809 199 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 RORAP35398 523 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 CENPAP49450 140 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 LGALS3BPQ08380 585 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SERTAD2Q14140 314 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 EBPQ15125 230 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 ETFDHQ16134 617 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SMUG1Q53HV7 270 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 TCTE1Q5JU00 501 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 LIPNQ5VXI9 398 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 RPL22L1Q6P5R6 122 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC35D2Q76EJ3 337 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 TMPRSS9Q7Z410 1059 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 TPRA1Q86W33 373 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 C17orf82Q86X59 251 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 CMTM4Q8IZR5 234 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SYS1Q8N2H4 156 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC25A45Q8N413 288 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 PMEPA1Q969W9 287 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 CELSR3Q9NYQ7 3312 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 CEP192Q8TEP8 1941 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 FITM1A5D6W6 292 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 H0YC42 278 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZNF354AO60765 605 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 PIAS2O75928 621 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 GLULP15104 373 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 NXPH1P58417 271 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 FCN2Q15485 313 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 TMEM255AQ5JRV8 349 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms