RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 GPBAR1Q8TDU6 330 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 SFXN2Q96NB2 322 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ULBP3Q9BZM4 244 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 NRIP3Q9NQ35 241 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 IL20Q9NYY1 176 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 MOKQ9UQ07 419 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 PCDHGA3Q9Y5H0 932 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 MGAMO43451 1857 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 LMO7DNF2Z398 122 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 CT62P0C5K7 136 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 S100GP29377 79 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ARPC4P59998 168 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 DUSP2Q05923 314 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ABCA11PQ4W5N1 156 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 AWAT2Q6E213 333 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ARHGAP9Q9BRR9 750 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 RANBP3Q9H6Z4 567 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 NYNRINQ9P2P1 1898 aaKnown RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 NSG1A0A0A6YYJ2 146 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ANKRD61A6NGH8 418 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ACOT7O00154 380 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 GLCEO94923 617 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ERCC1P07992 297 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 CBX5P45973 191 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 C17orf67Q0P5P2 114 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 CAMK2DQ13557 499 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 TPBGQ13641 420 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 MRM1Q6IN84 353 aaKnown RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 METAP1DQ6UB28 335 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 NDUFAF7Q7L592 441 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 GDPD3Q7L5L3 318 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 INO80EQ8NBZ0 244 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 HAVCR2Q8TDQ0 301 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ELP5Q8TE02 316 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 OR11A1Q9GZK7 315 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 PPIL3Q9H2H8 161 aaKnown RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 SLC39A1Q9NY26 324 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 A0A0G2JMP0 313 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 A0A0X1KG70 313 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 OR2AT4A6NND4 320 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 HRO43593 1189 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 ICOSLGO75144 302 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 MPIG6BO95866 241 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 MVDP53602 400 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 TRIM61Q5EBN2 209 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 FAM69AQ5T7M9 428 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 LIPNQ5VXI9 398 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 ABHD12BQ7Z5M8 362 aaPredicted RBP12.05□□□□□ -0.48
TCF3-220ENST00000611869 SLC7A5P1Q8MH63 180 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 GPR137CQ8N3F9 429 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 OR4M2Q8NGB6 313 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 C8orf44Q96CB5 159 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 SLC41A2Q96JW4 573 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 URM1Q9BTM9 101 aaKnown RBP12.05□□□□□ -0.48
TCF3-220ENST00000611869 DPCDQ9BVM2 203 aaPredicted RBP12.05□□□□□ -0.48
TCF3-220ENST00000611869 OR51J1Q9H342 316 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 WDR76Q9H967 626 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 MCCC2Q9HCC0 563 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 H0YIG0 161 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 SPI1P17947 270 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 LTBQ06643 244 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 C11orf91Q3C1V1 193 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 ZNF628Q5EBL2 1059 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 C1orf140Q5VVS0 124 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 CCDC71Q8IV32 467 aaPredicted RBP12.05□□□□□ -0.48
TCF3-220ENST00000611869 SIRT6Q8N6T7 355 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 SIAEQ9HAT2 523 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 FGF20Q9NP95 211 aaPredicted RBP12.05□□□□□ -0.48
TCF3-220ENST00000611869 PISDQ9UG56 409 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 MGAT4AQ9UM21 535 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 IGHV5-51A0A0C4DH38 117 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 IGKV1-8A0A0C4DH67 115 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 TEX13DA0A0J9YY54 714 aaPredicted RBP12.05□□□□□ -0.48
TCF3-220ENST00000611869 OR14I1A6ND48 311 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 A8MVM7 634 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 ALOX12BO75342 701 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 ARSBP15848 533 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 RBMS1P29558 406 aaKnown RBP12.05□□□□□ -0.48
TCF3-220ENST00000611869 ACTBP60709 375 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 ACTG1P63261 375 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 CDK5Q00535 292 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 Q499Y3 187 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 TMEM205Q6UW68 189 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 LYPD4Q6UWN0 246 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 OR5J2Q8NH18 312 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 THAP6Q8TBB0 222 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 HYLS1Q96M11 299 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 FKBP14Q9NWM8 211 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 TAS2R8Q9NYW2 309 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 GSKIPQ9P0R6 139 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 NPFFR2Q9Y5X5 522 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 LRRC37A2A6NM11 1700 aa12.05□□□□□ -0.48
TCF3-220ENST00000611869 SCN5AQ14524 2016 aa12.04□□□□□ -0.48
TCF3-220ENST00000611869 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
TCF3-220ENST00000611869 WRBO00258 174 aa12.04□□□□□ -0.48
TCF3-220ENST00000611869 SULT1C4O75897 302 aa12.04□□□□□ -0.48
TCF3-220ENST00000611869 NME1P15531 152 aaKnown RBP12.04□□□□□ -0.48
TCF3-220ENST00000611869 PEBP1P30086 187 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms