RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 HLA-DOBP13765 273 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 NAA10P41227 235 aaPredicted RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 DNASE1L1P49184 302 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 CLK1P49759 484 aaKnown RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 SSX1Q16384 188 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 RGS21Q2M5E4 152 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 SPINK14Q6IE38 97 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 LSM14AQ8ND56 463 aaKnown RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 PROKR2Q8NFJ6 384 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 C9orf43Q8TAL5 461 aaPredicted RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 OPALINQ96PE5 141 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 CENPOQ9BU64 300 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 CCDC86Q9H6F5 360 aaKnown RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 GPN2Q9H9Y4 310 aaPredicted RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 SDHAF3Q9NRP4 125 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 B3GNT3Q9Y2A9 372 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 A0A1W2PNR3 127 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 DCTN6O00399 190 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 NPIPB7O75200 414 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 CLPXO76031 633 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 AHSA1O95433 338 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 HPP00738 406 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 CD14P08571 375 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 UQCRC1P31930 480 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 PYCR1P32322 319 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 PLPPR5Q32ZL2 321 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 VASH2Q86V25 355 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 BEST3Q8N1M1 668 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 RFLNBQ8N5W9 214 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 SLC15A4Q8N697 577 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 OR2M3Q8NG83 312 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 PSMF1Q92530 271 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 GPR87Q9BY21 358 aa11.12□□□□□ -0.63
TP53-219ENST00000610538 EXOSC4Q9NPD3 245 aaKnown RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 SPIN1Q9Y657 262 aaPredicted RBP11.12□□□□□ -0.63
TP53-219ENST00000610538 ARHGEF9O43307 516 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 GABARAPO95166 117 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 GPANK1O95872 356 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 LALBAP00709 142 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 ITGA3P26006 1051 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 NBL1P41271 181 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 NOVA1P51513 510 aaKnown RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 C1DQ13901 141 aaKnown RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 ASCL5Q7RTU5 278 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 ZNF367Q7RTV3 350 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 MAMDC2Q7Z304 686 aaPredicted RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 FAM122BQ7Z309 247 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 GID4Q8IVV7 300 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 LRRC75AQ8NAA5 344 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 POC1BQ8TC44 478 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 RNF138Q8WVD3 245 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 ST8SIA1Q92185 356 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 TSPAN32Q96QS1 320 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 CCNL2Q96S94 520 aaPredicted RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 FKRPQ9H9S5 495 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 C12orf10Q9HB07 376 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 FGF20Q9NP95 211 aaPredicted RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 MRPS18AQ9NVS2 196 aaKnown RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 ZNF229Q9UJW7 825 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 CCDC182A6NF36 153 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 C21orf140B9A014 251 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 J3QRK9 145 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 SULT1C4O75897 302 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 AKR7A3O95154 331 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 OR6A2O95222 327 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 SHC1P29353 583 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 RBMS1P29558 406 aaKnown RBP11.11□□□□□ -0.63
TP53-219ENST00000610538 MELKQ14680 651 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 LINC00696Q6ZRV3 163 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 PLCZ1Q86YW0 608 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 SMPDL3BQ92485 455 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 C1GALT1C1Q96EU7 318 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 RACGAP1Q9H0H5 632 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 PTGES2Q9H7Z7 377 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 ERVK13-1Q9NX77 482 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 BAIAP2Q9UQB8 552 aa11.11□□□□□ -0.63
TP53-219ENST00000610538 CPAMD8Q8IZJ3 1885 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 DAPL1A0PJW8 107 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 M0R3G1 203 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 PSMD9O00233 223 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 CCRL2O00421 344 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
TP53-219ENST00000610538 SERPINA7P05543 415 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 PRKAR1AP10644 381 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 RFC3P40938 356 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
TP53-219ENST00000610538 RPS27P42677 84 aaKnown RBP11.1□□□□□ -0.63
TP53-219ENST00000610538 HTR3AP46098 478 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 WNT4P56705 351 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 SNTA1Q13424 505 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 DCAF10Q5QP82 559 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.1□□□□□ -0.63
TP53-219ENST00000610538 ACBD7Q8N6N7 88 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 OR5J2Q8NH18 312 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 PAQR8Q8TEZ7 354 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 LIPHQ8WWY8 451 aa11.1□□□□□ -0.63
TP53-219ENST00000610538 OR5B2Q96R09 309 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms