RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 SLC43A1O75387 559 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 VAMP5O95183 116 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 NPPAP01160 153 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 C8BP07358 591 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 ADORA3P0DMS8 318 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 CD99P14209 185 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 KDELR2P33947 212 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 CDKN1AP38936 164 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 PUDPQ08623 228 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 PIN1Q13526 163 aaPredicted RBP12.7□□□□□ -0.38
HDDC2-204ENST00000608295 PHYHD1Q5SRE7 291 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 SWT1Q5T5J6 900 aaKnown RBP12.7□□□□□ -0.38
HDDC2-204ENST00000608295 SLC22A25Q6T423 547 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 C5orf46Q6UWT4 87 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 ARPINQ7Z6K5 226 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 MEX3DQ86XN8 651 aaKnown RBP12.7□□□□□ -0.38
HDDC2-204ENST00000608295 KRTAP1-3Q8IUG1 177 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 GPR137CQ8N3F9 429 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 RNF148Q8N7C7 305 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 RBM15BQ8NDT2 890 aaKnown RBP12.7□□□□□ -0.38
HDDC2-204ENST00000608295 TMEM171Q8WVE6 324 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 RASSF5Q8WWW0 418 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 GTPBP3Q969Y2 492 aaKnown RBP12.7□□□□□ -0.38
HDDC2-204ENST00000608295 TMEM43Q9BTV4 400 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 SLC17A5Q9NRA2 495 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 BAG5Q9UL15 447 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 V9GYQ6 96 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 GMNCA6NCL1 334 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 SHISA9B4DS77 424 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 MS4A18H0YCH9 400 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 CXCR6O00574 342 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 SOD3P08294 240 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 FUT4P22083 530 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 PTH2RP49190 550 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 GSK3BP49841 420 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 UGT2B15P54855 530 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 PSME3P61289 254 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 TGFBR3Q03167 851 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 CAMK2DQ13557 499 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 VEZF1Q14119 521 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 CEACAM16Q2WEN9 425 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 MS4A18Q3C1V0 323 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 TBRG1Q3YBR2 411 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 ZNF672Q499Z4 452 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-204ENST00000608295 OR7E24Q6IFN5 339 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 B3GLCTQ6Y288 498 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 OR1K1Q8NGR3 316 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 OR5J2Q8NH18 312 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 PIGTQ969N2 578 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 FAM162AQ96A26 154 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 ZNF837Q96EG3 531 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-204ENST00000608295 MUS81Q96NY9 551 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 OR2M2Q96R28 347 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 ALG2Q9H553 416 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 EVA1AQ9H8M9 152 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 SEC61A2Q9H9S3 476 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 B3GALT5Q9Y2C3 310 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 MAGED1Q9Y5V3 778 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-204ENST00000608295 SNX13Q9Y5W8 968 aa12.69□□□□□ -0.38
HDDC2-204ENST00000608295 ATP6V1G2-DDX39BF2Z307 99 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 J3KTA2 159 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 AKAP8O43823 692 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 OR6A2O95222 327 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 SERPINA1P01009 418 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 IFNA14P01570 189 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 FUT1P19526 365 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 TCN1P20061 433 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 CD40P25942 277 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 CAPZA2P47755 286 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 BIDP55957 195 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 UBE2NP61088 152 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 RPS4XP62701 263 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ARF1P84077 181 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ZNF74Q16587 644 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 KLHL17Q6TDP4 642 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 TMEM108Q6UXF1 575 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 NANOGNBQ7Z5D8 188 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ABHD12BQ7Z5M8 362 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 YTHDF3Q7Z739 585 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 P2RY8Q86VZ1 359 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ZNF611Q8N823 705 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 FAM156AQ8NDB6 213 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 C1orf162Q8NEQ5 155 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 OR6N1Q8NGY5 312 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 HTRA1Q92743 480 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 HSH2DQ96JZ2 352 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 Q96MF0 132 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 KCTD14Q9BQ13 255 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 PRSS27Q9BQR3 290 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 AMBRA1Q9C0C7 1298 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 EFCAB1Q9HAE3 211 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 CRLF2Q9HC73 371 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 MEPEQ9NQ76 525 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 C20orf141Q9NUB4 165 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ADA2Q9NZK5 511 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 EGFL7Q9UHF1 273 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 RIMS3Q9UJD0 308 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms